Heatmap: Cluster_58 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	second leaf,natural sun/80% shade	third leaf,2-year-old,no treatment	third leaf,2-year-old,shade treatment	fourth leaf,10-year-old,no treatment	fourth leaf,10-year-old,shading treatment	two leaves and a bud,blue light 15d	two leaves and a bud,blue/red (1:1) light 15d	two leaves and a bud,red light 15d	two leaves and a bud,white light 15d	second leaf,missing,no treatment	leaf,missing,no treatment	two leaves and a bud,missing,no treatment	tender leaf,red/white (2:3) light 10d	tender leaf,white light 10d
HUANGJINYA00077	-0.21	0.88	-	-	0.02	1.12	0.44	0.74	1.56	-	0.45	-1.77	-2.04	-2.25
HUANGJINYA00107	-0.29	-0.19	-0.93	-2.16	-1.12	0.26	0.89	1.63	1.53	-1.53	-	0.14	-1.37	-2.07
HUANGJINYA00137	-0.27	-0.19	-1.74	1.01	-0.13	1.61	-	-	1.55	0.28	-	-	-0.59	0.26
HUANGJINYA00902	-2.64	-0.03	0.17	-	-	0.74	0.32	-0.13	2.98	-	-	-	-	-
HUANGJINYA01006	-3.99	-	0.51	-	0.29	0.82	1.49	-0.13	1.87	-1.37	-0.27	-	-	-0.12
HUANGJINYA01088 (TPS03)	0.76	-	-0.43	-	2.84	1.12	-	-	1.17	-	-	-	-	-
HUANGJINYA01211	-0.17	-0.94	0.1	0.58	0.84	-0.15	-0.43	1.15	0.59	-0.67	-0.94	-	0.6	-2.25
HUANGJINYA02870	-1.91	0.02	1.21	0.08	-0.18	-0.66	1.14	0.5	0.59	0.03	-1.06	-	-0.39	-1.14
HUANGJINYA03036	-0.77	-1.63	-1.12	0.23	-	1.04	0.6	0.82	0.12	0.72	0.72	-	0.01	-0.46
HUANGJINYA03127	-0.94	0.03	-0.63	1.08	0.72	-	-0.27	-0.27	0.72	-0.53	1.23	-	-1.04	0.29
HUANGJINYA03264	-1.67	-0.4	-1.18	1.24	-0.45	-1.49	0.91	-0.42	-0.42	-1.11	0.3	-0.23	0.99	0.18
HUANGJINYA05510	-0.49	-	-	0.29	-	0.88	1.96	-	0.94	-1.3	-	-	1.63	-0.11
HUANGJINYA05664	-0.76	-1.05	-0.76	-	-	1.33	0.4	-0.6	-0.61	-	0.22	0.8	1.39	0.73
HUANGJINYA06083	-0.14	-0.74	-1.02	0.08	-1.48	0.35	0.01	-0.1	1.22	-1.05	0.81	-2.84	0.17	0.62
HUANGJINYA07872	0.72	-1.41	0.27	1.11	0.32	-	-0.06	-	0.91	-0.18	-0.25	-0.02	0.12	-0.44
HUANGJINYA08051	-	-	-	-	-	-	-	1.15	3.11	1.67	-	-	-	-
HUANGJINYA08388	-1.28	0.71	-17.95	-1.57	-0.1	-3.16	-0.22	1.62	2.73	-	-	-	-	-
HUANGJINYA08667	-2.15	-	1.03	-	-	-	2.66	-	2.43	-	-	-	-	-
HUANGJINYA09432 (PLC1)	-1.4	-0.28	-0.27	-3.16	0.33	-0.58	0.5	-1.45	0.38	0.96	-	-0.04	0.68	1.22
HUANGJINYA09468	-0.76	-	-0.67	-	0.48	1.01	-	-	1.07	0.8	-	-	1.27	1.65
HUANGJINYA09492	-0.02	-	-0.16	0.15	1.02	-0.27	0.4	-1.2	1.11	-1.54	-0.27	0.24	0.32	-0.63
HUANGJINYA09637 (CRK8)	0.27	0.03	0.49	0.09	-0.31	0.21	-	-1.34	0.64	-0.86	0.72	0.0	0.25	-0.01
HUANGJINYA09953	-0.03	-1.45	0.18	-	-	0.45	1.03	1.11	2.17	-0.3	-	-	-1.13	-2.25
HUANGJINYA10168 (GUS3)	-1.31	-1.7	-0.74	-1.28	-	-0.76	0.65	1.12	2.04	-0.31	-0.15	-	-0.56	0.53
HUANGJINYA10254	0.36	-1.55	-1.24	-0.42	0.2	0.87	0.55	0.67	1.15	-0.24	-0.79	-1.38	-0.74	-0.86
HUANGJINYA10686	-0.63	-2.11	0.31	-1.63	-1.46	0.66	0.5	0.13	1.66	-1.18	-0.91	-1.52	-0.2	0.81
HUANGJINYA11103	-1.62	-	-	-	-	-	-0.47	0.52	2.11	-0.21	-0.55	-0.13	1.69	0.61
HUANGJINYA11135	-0.76	-	-	-0.26	-	-	-	-	1.39	-	2.03	-0.44	1.46	1.26
HUANGJINYA11174	-1.27	-	0.61	-0.82	0.28	-	0.9	-	1.88	-0.09	-0.34	-	0.14	0.92
HUANGJINYA12321	-0.12	0.16	0.78	-0.07	-	-	-	-	1.61	0.36	0.51	-	1.82	-
HUANGJINYA12607 (EIF3B)	-1.0	-0.84	-0.69	-	-1.84	-	0.21	0.58	1.88	0.56	-	-0.44	1.35	-0.08
HUANGJINYA12837	-3.61	-0.15	-0.42	-	-	-0.86	0.96	1.71	2.42	-1.6	-0.61	-	-2.82	-
HUANGJINYA12861	-0.04	-1.09	1.04	0.39	0.68	0.2	-0.33	-0.6	-0.38	-0.12	0.6	-2.26	-0.6	-0.13
HUANGJINYA12939	-1.03	0.5	0.39	-3.3	-0.71	0.93	0.12	0.75	1.19	0.3	0.26	-	-2.52	-0.94
HUANGJINYA13831	-0.37	1.04	-	0.49	-	-	-	-	2.08	-0.11	-	-	1.33	1.08
HUANGJINYA14981	0.2	-	0.26	-	-0.13	1.81	-	-0.64	2.43	-	-	0.27	-	-
HUANGJINYA16843	-3.08	-0.2	-	-0.43	1.65	-	-	0.25	1.24	-2.09	1.14	1.3	-0.61	-
HUANGJINYA17204	-1.11	-1.73	-0.72	-0.71	-2.16	0.07	0.24	0.88	1.44	0.2	-1.76	-2.5	1.45	-0.62
HUANGJINYA17414	0.24	0.24	0.33	-0.26	-1.19	0.45	0.15	-0.02	0.44	0.92	-0.41	-3.4	-0.2	-0.57
HUANGJINYA17587	0.21	0.03	-0.06	-1.05	0.44	1.41	0.46	-0.32	1.01	-0.41	-0.34	-	-1.69	-1.67
HUANGJINYA18619	-0.16	-1.88	0.49	-0.49	-0.48	1.22	0.12	-0.83	-0.67	0.5	0.28	-0.63	0.22	-0.06
HUANGJINYA18685	-	-	-	-	-	-	-	-	3.34	-0.44	-	-	-	1.66
HUANGJINYA18790	-1.25	-0.2	0.6	0.12	-0.68	0.6	1.52	-1.1	1.13	-0.23	-0.11	-	-1.13	-2.36
HUANGJINYA19200	-0.24	-1.35	0.16	-2.35	-3.16	1.02	-1.63	-0.95	2.79	-0.43	-1.05	-3.73	-3.97	-2.48
HUANGJINYA19339	0.13	-	0.67	-	-	1.35	0.44	-0.58	-0.59	0.75	-	-	-	2.13
HUANGJINYA20213	-0.42	-1.05	-1.6	-0.62	-	-	0.98	0.96	1.55	-2.26	-0.11	0.4	0.17	0.45
HUANGJINYA20236	-0.84	-	0.03	-	0.17	0.93	0.81	-23.67	2.39	-1.32	-	-	0.03	-0.03
HUANGJINYA20381	-1.05	-	1.81	-	1.0	-	1.65	-	1.62	-	-	-	0.86	-
HUANGJINYA20924	-0.95	2.05	-	-	-	-	-	-	2.19	-	-	-	1.33	1.19
HUANGJINYA22139 (CRK8)	0.77	0.38	-0.36	-0.07	-0.01	1.25	0.41	-	-	-0.27	1.9	-	-	-
HUANGJINYA22149	-1.46	-1.54	-30.54	-	-	-19.6	-0.39	-7.67	1.85	-1.19	0.53	2.4	-0.58	0.12
HUANGJINYA22396	-0.76	-1.53	-0.12	-0.26	-0.53	-2.0	0.88	0.64	1.51	0.77	-	-0.32	-0.31	-0.32
HUANGJINYA22641	-0.76	-0.47	-0.03	-0.41	0.4	-0.35	0.27	-0.29	1.78	-1.98	0.38	0.14	-1.11	-1.96
HUANGJINYA23589	0.26	-0.49	0.61	-0.72	0.29	-23.01	0.56	-0.71	0.26	0.25	-0.03	-2.25	0.64	0.59
HUANGJINYA23633	-0.26	0.02	0.42	-1.74	-	0.14	-0.85	-0.11	2.97	-21.31	-	-3.26	-	-
HUANGJINYA23787	-0.18	0.46	0.02	-0.56	0.66	1.58	-1.14	-0.17	0.15	-1.63	-1.49	0.56	-0.93	-1.57
HUANGJINYA23927	-2.01	-1.23	-0.73	-	-0.09	1.41	0.99	0.13	1.85	-0.29	-11.29	-	0.71	-
HUANGJINYA24217	-1.04	-3.04	-1.12	-0.71	1.15	-1.66	-0.17	-0.27	0.78	0.22	0.25	-0.56	1.15	0.15
HUANGJINYA24494	-0.55	-0.05	0.88	-2.41	-2.01	-2.56	1.75	0.63	2.11	-0.71	-8.39	-	-3.81	-
HUANGJINYA24537	-0.19	0.12	0.34	-1.78	-0.4	1.16	0.64	-1.01	1.37	-0.21	-2.28	-	-0.1	-0.22
HUANGJINYA25474	-0.96	-2.17	-	-	-1.64	-	1.46	-1.73	1.42	-0.02	-	-1.43	1.33	1.74
HUANGJINYA26339	0.69	0.53	1.37	0.27	0.27	0.82	-0.64	-	-0.74	-0.75	-	0.1	-1.59	-0.07
HUANGJINYA28390	-2.64	0.32	-	-	-	-	-	2.1	2.84	-2.18	-	-	-	-0.12
HUANGJINYA28544	-3.81	-3.33	-	-1.75	0.5	1.89	0.92	-	1.3	-1.35	0.28	-0.33	-0.06	-0.54
HUANGJINYA28918	0.62	-0.67	0.87	-1.13	0.51	-1.53	0.56	0.12	1.23	-0.38	0.3	-	-1.19	-1.21
HUANGJINYA29086	-0.98	-0.0	0.75	-0.14	-1.1	-0.6	0.7	-0.06	0.81	-0.49	0.71	-1.12	-0.7	0.04
HUANGJINYA30346	-	-	-	-	-	-	-	2.38	3.14	-	-	-	-	-
HUANGJINYA31125	-1.05	0.38	0.64	-	-	-0.59	1.36	-0.25	2.1	0.23	-0.48	-1.82	-	-3.2
HUANGJINYA31851	-2.98	-3.38	-0.86	-0.81	0.43	1.53	0.85	0.49	1.45	0.4	-	-	-0.63	-0.91
HUANGJINYA32126	-0.72	-	-1.26	-	-	-	-	-	1.62	2.04	-0.95	0.29	1.58	0.1
HUANGJINYA32450	-0.67	0.19	-0.46	-2.37	-1.11	-1.05	0.33	0.26	2.3	1.37	-	-3.86	-2.92	-2.39
HUANGJINYA32502	0.35	-0.54	0.55	-	-0.09	1.62	0.63	-1.12	0.56	0.06	-0.21	-0.82	-1.73	-1.72
HUANGJINYA32741 (NAC058)	-1.74	-	-0.24	-	0.24	-	1.24	-0.76	1.24	-2.01	-0.63	-	2.14	0.09
HUANGJINYA32827	-0.5	1.8	-	-	-	-0.43	0.63	-	1.82	-2.57	1.01	0.47	-	-1.22
HUANGJINYA33091	-0.55	-0.88	-0.51	-1.22	-0.23	-0.02	0.41	1.26	2.12	-0.83	-0.34	-1.82	-4.24	-4.26
HUANGJINYA33160	-0.71	-0.18	-0.28	0.19	-0.31	0.81	1.1	0.87	1.42	-1.37	-	-	-1.48	-0.73
HUANGJINYA33436	0.04	-	1.22	-0.71	-	-	1.55	-	2.83	-	-	-	-	-
HUANGJINYA34265	-0.83	0.34	-0.48	0.19	1.0	1.23	-0.69	-	1.29	0.19	0.0	-1.28	-1.47	-
HUANGJINYA34622	0.87	-	1.92	-	-	-	-	-	2.22	-1.02	0.9	-	0.46	-
HUANGJINYA34900	-0.06	0.02	-	0.95	1.04	-	-	-	1.64	-	-	-	0.81	1.66
HUANGJINYA35892	0.66	-0.94	-0.15	-1.66	-1.44	2.09	0.92	-1.08	-0.76	0.16	-0.49	-0.78	-1.06	-2.22
HUANGJINYA36202 (PSP)	-2.82	-	-	-	-	-0.23	1.15	0.2	1.95	0.87	-	-0.4	1.67	-
HUANGJINYA36256	-	-1.04	0.16	-0.6	-	0.03	1.1	-	0.11	0.24	-0.1	-	1.76	0.99
HUANGJINYA36691 (ORF240B)	-3.7	-	0.7	-	0.9	1.27	-	1.32	1.87	-	-	-	0.91	-
HUANGJINYA36964	-2.35	-	-0.95	0.26	-	0.88	0.95	-	1.94	0.29	-	-	1.11	0.12
HUANGJINYA37317	-1.95	-1.19	0.76	-0.48	-1.55	-0.59	-0.61	-0.34	1.89	-0.68	1.47	-	-1.18	-0.18
HUANGJINYA37377	-0.74	-0.02	-0.34	-	1.46	0.01	1.09	-	2.08	-2.12	-	-0.59	-0.68	-
HUANGJINYA37385	0.05	1.5	0.93	-	1.32	-1.11	-2.39	0.34	1.93	-	-	-	-	-
HUANGJINYA38193 (HSL2)	-1.32	-0.84	-1.38	-30.44	-0.04	0.41	0.76	-0.85	2.17	-0.92	1.18	-20.83	-3.02	-0.48
HUANGJINYA38330 (SNF4)	-3.22	-	-	-0.35	0.17	-	0.15	1.91	2.46	-5.25	-0.52	-	-1.09	-1.25
HUANGJINYA38666	0.22	-0.89	-0.46	-1.55	-1.5	-1.67	-0.18	0.4	-0.61	0.17	0.55	-0.25	1.42	0.67
HUANGJINYA39004	-0.76	-	1.06	-0.77	-	0.89	-	-	1.83	0.42	-0.34	-	-0.91	1.42
HUANGJINYA39017	-0.48	0.64	0.07	0.11	0.14	0.22	0.89	0.51	0.66	-0.72	0.09	-5.04	-1.54	-1.26
HUANGJINYA40419	-1.56	0.3	0.35	0.33	0.22	-0.25	0.83	0.68	0.64	-0.9	1.1	-3.59	-	-2.51
HUANGJINYA40425	-	-	-0.67	-0.69	1.32	-1.12	-	-	2.22	-2.26	-	1.98	-	-0.01
HUANGJINYA40890	-1.11	-2.47	-	0.74	-1.73	-0.47	-	2.17	2.1	0.12	-	-	-0.64	-2.99
HUANGJINYA41513	-1.03	-0.41	-1.09	-3.03	-2.75	-0.42	0.43	1.08	1.47	0.01	1.81	-2.97	-1.52	-4.28
HUANGJINYA41776	0.22	-0.22	0.16	-0.77	1.57	0.03	0.33	-0.49	0.51	-0.23	-2.27	-1.19	-1.42	0.03
HUANGJINYA42201	-1.75	-	-	-0.2	1.36	-	0.98	0.96	2.38	-1.95	-0.85	-	-	-1.62
HUANGJINYA42255	0.81	0.34	0.37	0.02	-0.5	0.02	-0.9	-0.91	1.41	-0.2	-1.04	-1.6	0.29	-1.73
HUANGJINYA42309 (ORF240B)	-0.76	-1.12	1.82	-	-0.12	-	0.5	0.47	1.47	-1.19	1.31	-	-	-
HUANGJINYA43224	0.06	-	0.59	-0.37	-	-	-0.62	-0.65	0.93	-0.08	1.89	-1.45	0.57	-0.03
HUANGJINYA44013 (ATH9)	0.05	-0.77	-0.5	0.05	0.72	0.22	-0.39	-	0.41	-1.26	0.99	-0.9	0.56	0.4
HUANGJINYA44059	-0.86	-	-3.11	-2.37	0.22	-0.38	1.66	-0.18	2.46	-1.13	-1.97	-	-1.5	-0.75
HUANGJINYA44568	0.32	-2.01	0.1	-0.04	1.28	1.92	-0.73	-0.85	-0.26	-1.65	-	0.24	-0.79	-2.52
HUANGJINYA44803	1.02	1.28	0.86	-0.19	-	-	-	-	0.48	0.52	-	-0.2	1.3	-0.51
HUANGJINYA44885	0.46	-	-2.81	-	-	1.27	0.78	1.15	2.34	-3.79	-1.51	-1.17	-2.42	-
HUANGJINYA45498 (RBOHB)	-0.77	-2.01	-0.8	0.22	-0.28	-0.72	0.69	-0.14	1.46	-	-0.27	-1.79	0.89	0.81
HUANGJINYA46143	-0.76	-2.27	0.09	-1.52	1.65	0.8	0.99	-	0.57	-	-0.88	-	-0.14	0.99
HUANGJINYA46293	-1.33	-1.51	0.51	-	-	-1.07	0.39	0.65	2.43	0.78	-	-	-0.26	-0.99
HUANGJINYA46656	-1.08	0.09	0.12	0.43	0.5	0.04	0.03	0.3	0.91	-0.6	-0.0	-1.24	-0.36	-0.75
HUANGJINYA46878	-0.07	-0.21	0.15	0.09	0.48	-1.32	0.77	-1.25	1.55	-0.52	0.63	-	-1.06	-1.15
HUANGJINYA47155	-1.02	0.33	-0.73	-0.34	-0.82	0.15	1.3	1.69	1.31	-6.78	-14.99	-1.26	-1.05	-3.17
HUANGJINYA47328	0.2	-0.34	1.18	-0.0	-2.27	-1.67	-	-0.0	1.37	0.26	-0.79	0.57	-2.53	0.33
HUANGJINYA47613 (CYCD3)	-0.56	0.64	0.81	-1.23	1.26	-1.02	-0.1	0.41	-0.05	0.45	-	-1.14	-0.0	-0.63
HUANGJINYA47702 (MLO4)	0.23	0.8	-1.47	1.17	0.36	-	-1.37	-1.38	0.2	-1.01	0.32	0.68	-0.43	0.24
HUANGJINYA48120	0.52	-2.49	-0.77	-1.43	1.59	0.7	-0.22	-0.24	0.5	-0.48	-0.06	-	-0.99	0.59
HUANGJINYA48224 (SEH1H)	-0.85	-0.24	-1.18	-1.29	0.8	-	-	-	0.58	-0.08	1.64	1.51	-0.68	-0.03
HUANGJINYA49879	-0.15	-2.02	1.37	0.54	-0.98	0.56	-0.34	-	-	-1.07	1.45	0.0	0.87	-
HUANGJINYA51985	-1.64	-0.93	1.02	-0.69	-0.58	0.45	-0.46	-0.48	-0.33	-0.4	-0.31	0.98	0.69	0.1
HUANGJINYA52950 (DUT1)	0.97	-0.69	-	-0.52	-	1.76	-27.92	0.55	2.31	-1.18	-	-1.12	-	-
HUANGJINYA53180	-1.15	-1.18	-1.03	-0.66	-1.67	1.03	0.92	0.07	1.12	-1.23	-2.0	-	1.25	0.55
HUANGJINYA53420	-1.71	-	-0.55	-	-	2.42	-	-	2.47	-0.92	0.68	-	-	-
HUANGJINYA54066	-0.73	-0.7	-	-	-	0.63	1.34	-	1.88	-	-	-	2.33	-
HUANGJINYA55124	-0.85	-1.1	0.02	-0.89	1.18	-0.72	0.82	-0.62	-0.83	-1.41	0.29	-0.78	0.74	0.78
HUANGJINYA56229	-0.75	-	-	-	-	-	-	2.33	3.07	-	-	-	-	-
HUANGJINYA56452	-0.73	-	-	-	-	-	0.8	0.8	-	-1.4	-	0.14	2.53	1.41
HUANGJINYA57010	-0.92	-1.35	-2.34	-0.3	-	0.29	-0.3	0.61	-0.86	0.37	1.6	-1.69	0.8	0.65
HUANGJINYA57235 (HSL1)	-0.76	-0.07	-1.71	-0.48	0.16	0.75	0.15	-0.22	1.74	-1.2	-1.85	0.17	-0.62	-0.26
HUANGJINYA57772	0.81	0.15	-0.17	-0.22	-0.28	0.06	-0.36	0.4	1.24	-1.0	-0.91	-2.73	0.1	-0.31

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.