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Heatmap: Cluster_5 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
one leaf and a bud,4-year-old,no treatment
two leaves and a bud,missing,no treatment
leaf,missing,no treatment
second leaf,missing,no treatment
leaf,5-year-old,missing
mature leaf,missing,no treatment
new shoot leaf,missing,no treatment
two leaves and a bud,missing,missing
leaf,10-year-old,no treatment
-1.3 -0.32 0.33 0.46 0.07 -1.36 -1.65 0.64 0.88
0.27 0.47 0.65 -0.37 -0.28 -2.64 -0.4 -0.72 0.79
-1.96 -1.42 0.94 -1.16 0.68 0.17 0.29 0.3 -0.29
ZIJUAN06587 (CPK28)
 0.54 0.09 0.1 0.53 -0.53 -1.04 -0.31 0.08 -0.12
-0.6 -0.13 0.45 0.06 0.12 -0.49 -0.01 0.28 0.0
ZIJUAN09867 (MPK4)
 0.16 0.29 0.26 0.03 -0.42 -0.39 0.33 -0.34 -0.18
ZIJUAN11238 (ACI1)
 -0.2 -0.46 0.59 -0.37 0.02 -0.48 -0.84 0.33 0.66
ZIJUAN14462 (HSI2)
 -0.36 0.4 0.2 -0.18 -0.26 -0.23 -0.15 0.1 0.27
- 1.2 1.0 0.48 -0.25 - -0.8 - 0.92
ZIJUAN20071 (RABH1e)
 -1.3 0.28 0.4 0.09 -0.1 -0.62 -0.34 -0.25 0.83
0.32 -0.39 0.79 -0.34 - -1.14 -0.12 - 1.63
-3.56 -0.66 0.23 -0.15 0.29 0.26 -0.51 -0.53 1.26
ZIJUAN22806 (PEN3)
 0.33 1.3 0.58 -0.63 -0.82 -2.21 -1.09 -0.16 -0.02
ZIJUAN24170 (ATSIK)
 0.94 -0.05 0.21 0.15 -0.32 -0.48 -0.53 -0.35 -0.25
-1.36 0.5 0.33 -0.21 -0.28 -0.84 -0.5 0.22 0.86
ZIJUAN25393 (HSL1)
 0.94 0.18 0.34 0.08 -0.48 -1.63 -0.21 -0.17 -0.26
- -1.57 1.23 0.26 1.28 -0.66 0.37 -0.98 -1.93
-2.94 -0.71 1.49 0.13 0.45 -0.58 0.17 -0.26 -1.47
ZIJUAN27766 (PUB26)
 0.82 0.34 0.55 0.43 -0.41 -1.09 -0.98 -0.52 -0.47
-0.53 0.11 0.63 0.15 -0.24 -0.75 0.43 -0.42 0.04
-2.12 -0.69 0.57 -1.03 0.35 0.08 -0.13 -0.7 1.21
-2.3 0.6 0.21 0.1 -0.22 -0.91 -1.16 0.71 0.65
ZIJUAN31157 (ATY19)
 0.8 -0.18 -0.19 0.33 -0.57 -1.7 -0.05 -0.82 0.79
0.84 0.26 0.67 0.27 -0.77 -2.02 -0.84 -2.13 0.68
0.78 -0.06 -0.12 -0.24 -0.57 -0.84 -0.12 -0.16 0.58
0.69 -0.35 -0.82 1.18 -0.35 -2.32 0.3 0.44 -2.42
- -1.28 1.92 -0.43 0.73 -3.0 -1.36 0.32 -0.65
0.1 0.93 0.48 -2.05 0.16 -1.0 -2.28 -0.09 0.7
ZIJUAN35063 (RAB8)
 -1.78 -0.45 0.46 0.05 -0.16 -0.71 -0.12 -0.18 1.18
0.0 -0.11 0.04 -0.21 -0.44 -0.99 0.61 -0.13 0.58
- -0.2 0.69 0.49 0.83 0.06 0.17 -0.35 -1.36
0.56 0.24 0.66 -0.8 -0.51 -0.76 0.25 -0.95 0.26
ZIJUAN36461 (TPS14)
 0.35 0.24 0.61 0.25 -0.28 -2.51 -5.4 -0.26 0.98
ZIJUAN36462 (TPS14)
 -2.13 0.77 0.47 0.26 -0.46 -1.75 -6.2 0.05 1.27
-1.21 0.2 0.27 0.18 -0.01 -0.24 -0.53 0.13 0.53
ZIJUAN40142 (ITN1)
 0.59 0.14 0.26 0.14 -0.2 -0.69 -0.22 -0.42 -0.0
ZIJUAN40568 (PLP2)
 - -3.06 1.52 -0.19 0.78 0.44 0.06 -1.92 -0.39
1.52 0.45 0.15 0.51 -1.94 -0.43 - -1.59 -0.15
ZIJUAN41555 (AMT1;2)
 1.89 -0.24 0.64 -0.06 -1.21 -1.1 - - 0.04
-1.09 -0.37 0.5 -0.71 0.1 -0.68 -2.51 -0.0 1.52
0.23 -0.08 0.09 0.18 0.0 -0.28 0.13 -0.09 -0.26
-0.5 -0.13 0.37 -1.0 -0.75 -1.33 0.84 0.21 0.71
0.13 0.24 0.19 0.35 -0.54 -0.59 -0.31 0.04 0.17
-0.5 -0.04 0.49 -0.02 -0.22 -1.04 -0.03 0.1 0.61
ZIJUAN43496 (MYB36)
 -0.98 0.98 0.46 -0.2 0.01 -1.78 -3.31 0.52 0.52
-0.99 0.46 0.46 -0.84 -0.67 -0.46 -0.2 0.4 0.71
-5.21 0.56 0.63 0.33 -0.4 -0.39 -1.36 0.55 0.39
-1.18 0.18 0.13 -1.12 -0.61 -0.66 0.69 0.21 0.86
ZIJUAN45950 (BZIP53)
 -1.68 0.33 0.04 0.4 -0.34 0.22 -0.48 0.41 0.11
ZIJUAN46284 (TPS14)
 -1.1 0.54 0.64 0.41 -0.47 -3.35 -8.31 -0.3 1.35
ZIJUAN46527 (CRLK2)
 -0.06 0.3 0.34 -0.07 -0.68 -0.76 0.06 0.1 0.33
ZIJUAN47784 (CNGC15)
 -0.76 0.53 0.49 -1.25 0.1 -1.02 -0.79 -0.1 1.05
-1.71 0.42 0.17 -0.27 -0.04 0.09 0.05 -0.78 0.8
ZIJUAN48166 (SD2-5)
 -0.89 0.36 0.78 -0.44 -0.11 -2.38 -0.66 -0.58 1.2
0.15 0.09 0.24 0.38 0.13 -0.71 0.02 -0.38 -0.23
-2.13 0.5 0.07 -0.22 0.27 0.16 -0.15 -0.16 0.41
1.4 -0.3 0.25 0.2 -0.56 -0.88 -5.42 -0.01 -0.06
-0.06 0.53 0.87 -0.31 -0.02 -1.14 -1.34 -0.81 0.64
ZIJUAN55239 (RD17)
 0.25 -0.3 0.38 0.0 0.23 -0.57 -0.06 -1.11 0.5
-0.91 0.16 -0.24 -0.25 0.14 0.21 0.44 -1.34 0.73
ZIJUAN55850 (ACO1)
 -1.12 0.17 0.46 -0.2 0.36 -0.42 -0.65 0.24 0.4
ZIJUAN55920 (AtIPCS2)
 -2.57 0.33 0.43 0.21 -0.12 -0.19 -0.63 0.36 0.43
0.42 0.37 0.14 0.28 -0.47 -0.24 -0.28 -0.53 -0.04
ZIJUAN56734 (ATB2)
 -0.64 0.03 0.32 -0.05 -0.01 -0.5 0.23 0.12 0.21
0.92 -0.05 -0.04 -0.14 -1.21 -2.12 0.42 -1.47 0.93
-0.94 0.28 0.2 0.32 -0.15 -0.27 -0.51 0.22 0.35
-1.57 0.01 0.59 0.4 -0.27 -1.42 0.38 0.01 0.4
ZIJUAN59209 (GCN1)
 -1.83 0.55 0.35 0.0 -0.12 -0.81 -0.32 -0.2 0.86

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.