Heatmap: Cluster_286 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
leaf,4-year-old,green color stage
leaf,4-year-old,white color stage
leaf,4-year-old,yellow green color stage
leaf,9-year-old,young leaf
leaf,9-year-old,mature leaf
second leaf,missing,no treatment
two leaves and a bud,missing,no treatment
leaf,2-year-old,cold treatment for 24 h
leaf,2-year-old,room temperature for 24 h
leaf,missing,green stage
leaf,missing,regreening stage
leaf,missing,albinism stage
bud,missing,bud-prealbinism stage
1.62 0.51 0.66 - - - - - -18.19 1.65 - 1.92 -
-1.31 -0.42 -0.94 0.46 0.63 0.35 -0.06 -0.19 0.12 1.36 0.33 -1.39 -
1.6 - - - - -1.03 - 2.44 - 2.02 - - -
1.64 -0.18 -2.23 -0.24 1.67 - - 0.29 - 1.83 - - -
1.06 -0.2 -1.48 1.2 0.88 -1.51 0.83 -2.27 0.47 0.56 -1.49 - -
-0.69 0.19 -0.61 -0.12 1.43 1.34 -0.1 -0.23 -0.4 -0.35 0.16 - -
-0.29 0.13 -1.24 0.91 1.29 0.91 0.69 -1.12 -1.36 -0.39 -1.34 - -0.25
-0.76 -1.08 -0.65 0.19 0.76 0.21 0.15 0.84 0.04 0.48 0.39 -0.57 -
-1.68 -0.72 -0.97 1.33 1.21 0.46 -1.68 -0.64 -0.43 1.11 -1.27 -0.06 -2.86
-1.09 -1.58 -2.89 1.51 2.12 0.25 -1.39 - -2.51 1.64 - - -
0.93 0.9 -0.17 0.87 0.34 0.01 -2.0 -1.51 -1.27 1.55 -1.7 - -
0.4 -0.2 0.25 1.24 -0.59 0.77 1.26 0.39 -2.2 -0.23 - -3.08 -
0.2 0.51 -1.85 1.85 - 1.91 -1.04 -2.72 - 1.02 -2.92 - -
-0.02 - 0.5 - - - - 1.95 0.78 1.5 1.14 - -
0.28 -3.12 -2.8 0.35 2.27 -0.24 0.88 -3.33 0.23 0.54 - - -
-1.79 -0.57 -2.8 - 0.14 -1.82 - 1.61 1.2 2.09 -0.16 - -
-0.06 -1.01 -3.54 0.06 2.02 0.84 1.03 -0.51 -0.66 0.14 -3.32 - -
-2.37 -3.99 -2.14 1.34 1.91 0.39 0.64 -2.38 0.23 0.82 -2.14 - -
-2.22 -3.33 -1.67 2.0 1.65 0.5 -2.56 -1.94 -1.81 0.54 0.2 -1.19 -4.05
-0.98 -1.21 -0.31 1.37 -0.1 1.35 1.24 -1.72 -3.97 0.85 -0.59 - -
-0.29 -0.44 -3.05 1.77 0.42 0.66 -0.16 -0.38 -0.17 0.43 -0.79 -0.97 -
1.39 1.45 1.39 - - - - - -0.26 1.78 -0.41 - -
-0.24 -2.22 -0.86 -1.21 0.99 -0.74 -0.55 1.21 0.11 0.94 0.8 -0.65 -
-1.41 -1.35 -3.48 - 1.52 1.05 0.62 1.13 -0.03 -0.22 -0.74 0.06 -
-0.15 0.1 -1.04 -1.2 1.93 0.56 0.06 0.61 -1.15 -0.03 -0.29 - -
1.19 1.18 -0.96 0.81 1.14 1.11 - - - 0.87 - - -
-0.82 -1.22 -2.01 0.95 1.37 0.05 0.74 -0.23 -0.34 0.5 -1.34 -1.25 -0.61
-0.41 - - - 1.97 - - 1.81 -0.38 2.02 - - -
- -1.07 -2.18 0.76 1.08 - -0.02 - 1.18 1.86 0.68 - -
0.54 -1.67 -2.17 0.49 1.4 -1.87 -1.24 0.19 0.1 2.02 - - -
-0.96 0.84 0.63 0.75 -1.25 -1.93 -1.06 0.35 0.49 1.19 -1.48 -0.2 -3.22
-0.29 -0.36 -2.33 0.77 - 0.53 - - - 1.89 -0.23 1.0 0.6
-0.19 -0.61 0.14 1.13 -0.05 -1.78 -0.09 -0.71 0.75 1.2 -0.77 -0.32 -
2.65 -0.75 -1.28 - - -0.96 0.72 - - 1.84 - - -
- -2.33 -1.57 -0.62 - - -1.76 2.08 0.8 0.68 1.61 -0.13 -
-0.38 0.36 0.01 -1.62 0.02 -3.95 0.35 0.6 0.39 1.51 -2.35 0.48 -
-1.81 0.07 -0.73 0.2 1.4 0.68 0.58 0.01 -0.33 -0.25 -0.51 -0.29 -
-2.47 -0.57 -1.17 1.3 1.73 0.71 -1.39 -1.76 -1.86 0.81 -0.29 -0.39 -
1.64 0.4 -0.31 - 1.75 0.31 - - - 1.66 - - -
1.23 -2.2 -1.46 -0.85 - 1.92 - - - 1.53 1.51 - -
- 0.24 -0.48 1.8 1.93 - 0.2 - - 1.3 -2.43 - -
-0.29 -0.59 -1.35 - 1.43 0.84 - -0.54 0.98 1.3 0.61 - -
-1.37 0.85 0.49 0.11 - -1.11 -0.28 -1.07 0.96 0.58 0.05 0.98 -2.86
1.4 - - - - - - 1.38 1.4 2.35 - - -
1.5 1.66 0.76 -0.2 - - - - - 2.15 - - -
1.29 1.54 -0.1 1.05 0.37 -2.06 - - -0.53 1.27 - - -
2.19 1.48 0.13 - - - - - - 2.05 - - -1.28
0.3 -0.34 -1.94 1.64 0.74 -1.3 -0.22 -0.75 -1.06 1.03 -0.02 -0.8 -
-2.16 -0.16 -0.03 -0.53 -27.78 - -0.53 1.0 0.84 1.13 0.49 1.09 -
-2.66 -1.79 -1.82 1.47 2.11 0.22 0.66 -2.8 -2.22 1.02 - -4.29 -
0.29 -1.45 -0.16 1.64 1.33 -0.44 -1.68 -1.65 -2.3 0.97 -0.12 -1.2 -
0.6 0.03 -0.63 - 1.55 - 1.45 - -2.09 1.63 -0.27 - -
-2.22 -0.4 0.19 - -4.46 0.23 -7.74 1.22 - 0.43 1.09 1.91 -3.53
-2.22 -1.11 -2.04 1.32 0.53 0.2 0.36 0.06 0.77 1.12 -2.46 -0.73 -
- 0.78 -1.14 -1.36 1.55 0.34 -0.96 1.52 0.23 0.44 -1.65 - -
-2.85 -0.0 -0.94 1.12 1.45 1.36 0.48 -2.7 -2.52 1.0 -2.81 - -
0.21 - 0.92 - - -3.17 0.69 1.1 - 1.03 0.85 1.17 -
ANJIBAICHA39079 (YLMG1-2)
-1.29 -0.59 -0.45 1.25 - 1.96 0.52 - -3.47 0.24 - 1.15 -
2.09 0.48 0.14 0.33 - -1.96 - - - 2.25 - - -
-2.06 -0.2 -0.14 1.96 0.77 1.11 -1.06 -3.5 -3.18 -0.31 -2.57 0.61 -4.77
ANJIBAICHA42897 (RAD23C)
-0.37 0.68 -0.53 0.44 0.06 1.31 -0.72 -3.17 -0.76 1.21 -0.87 -0.16 -
- -3.3 -1.41 1.72 1.26 -0.19 0.67 -0.07 0.15 0.71 -0.56 - -
-2.84 -0.66 -1.46 -1.29 0.78 1.2 -0.98 0.74 -0.6 1.87 -0.04 - -
-0.23 -0.18 -0.05 -0.68 0.96 - - 0.77 0.49 0.55 0.86 0.42 -
1.48 0.57 0.56 - -0.11 - - - -1.6 1.96 0.59 -1.58 -2.02
-0.96 -0.61 -0.91 1.23 -0.18 1.77 0.35 -1.46 -1.63 1.06 -0.99 -3.31 -
- 0.57 - - - 0.98 1.3 0.13 0.45 2.21 - - -
-1.51 0.91 -0.81 -0.2 - -0.42 - 1.81 1.33 1.31 -3.64 - -
-0.86 -1.9 -0.54 1.11 1.23 1.53 0.2 -1.22 -1.9 0.34 - -0.03 -
0.83 -1.85 -2.87 0.68 2.01 -2.08 1.02 -0.44 -0.91 0.73 - - -
-0.45 1.62 0.87 - - -1.1 - 0.66 0.94 0.76 -0.31 -0.13 -
- 0.06 - - 2.43 -0.12 -1.45 1.56 -0.21 -0.36 -0.59 - -
-0.96 -0.19 -2.3 1.76 - 1.62 1.15 -0.73 - 0.48 -0.46 - -
-1.83 -0.97 -1.79 0.94 2.14 0.43 1.11 - - 0.74 -1.3 - -
1.32 -1.27 -0.95 -0.12 - -2.42 - 1.4 -0.04 1.91 0.14 - -
1.86 - - - - - - - - 2.53 - 1.85 -
-0.36 -1.12 - -0.43 1.82 0.86 1.36 -0.02 0.27 -0.76 -3.04 -2.27 -
-1.7 -0.2 -1.79 0.89 0.96 - - 0.85 -0.4 0.91 1.2 -0.02 -
-1.22 -0.05 -0.26 1.85 0.91 0.28 -3.35 -0.73 -0.5 0.23 - 0.57 -
0.01 -0.53 -1.48 -0.47 1.66 0.97 -2.77 -0.65 -0.56 1.43 -0.39 -3.2 -3.65
-1.55 -0.61 -0.19 1.31 0.63 1.24 -0.41 -0.6 -0.53 1.05 - -0.86 -
-0.21 0.1 -1.08 1.68 0.24 0.58 0.99 -3.79 -2.52 1.15 - -2.02 -
- -1.17 -0.56 1.93 -0.91 1.39 1.33 -2.42 -1.26 0.83 - - -
- 0.65 0.28 2.37 1.42 -1.17 -1.77 - - 0.71 - - -
0.08 1.66 0.23 - 0.6 -0.76 0.26 0.32 - 1.32 -1.79 -1.84 -
1.8 1.33 0.76 - - 0.07 -0.12 - - 1.74 - - -
-0.95 -0.99 -1.79 2.08 1.07 -1.27 0.49 -1.03 - 0.75 0.47 - -
1.75 1.13 -0.57 - -0.75 0.3 -1.11 - - 0.69 -0.99 1.19 -3.57
-0.08 0.84 -0.44 -1.08 0.83 1.28 -0.58 -1.04 -0.46 0.6 -1.03 -1.02 -1.09
0.43 -0.19 - - - - 1.99 -0.4 -0.21 2.38 - - -
2.21 0.75 0.42 - 0.2 - 0.58 -0.98 -1.89 0.64 -1.45 - -
-0.43 0.65 -0.29 2.48 1.48 - -2.88 -2.2 -2.21 -0.28 - -3.3 -
2.44 -0.06 -1.06 - - - - -0.3 - 2.0 - - 0.39
-0.41 -0.15 -1.54 0.93 1.36 1.14 0.73 -2.19 -1.94 0.37 -0.81 -1.63 -
- -0.31 - 1.2 -1.29 0.76 0.43 -1.88 -2.44 1.84 1.27 - -
- -1.21 - -0.22 1.1 - - 2.25 -0.12 1.96 - - -
-0.27 0.45 -0.93 0.73 1.1 1.08 0.34 -0.25 -0.64 -0.98 -1.78 -2.49 -0.65
-0.42 0.44 -4.2 1.5 0.82 1.2 0.03 - -3.64 1.0 -2.79 -0.53 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.