Heatmap: Cluster_30 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
leaf,4-year-old,green color stage
leaf,4-year-old,white color stage
leaf,4-year-old,yellow green color stage
leaf,9-year-old,young leaf
leaf,9-year-old,mature leaf
second leaf,missing,no treatment
two leaves and a bud,missing,no treatment
leaf,2-year-old,cold treatment for 24 h
leaf,2-year-old,room temperature for 24 h
leaf,missing,green stage
leaf,missing,regreening stage
leaf,missing,albinism stage
bud,missing,bud-prealbinism stage
-0.94 -1.02 -1.88 0.7 0.73 -1.01 -0.62 1.41 1.65 -1.44 -1.02 -1.07 -2.72
-1.85 -0.95 -1.41 0.56 0.98 - - 1.91 2.14 - - -2.06 -
-0.57 -1.1 -2.26 0.81 0.21 -0.71 -7.62 1.66 1.79 -1.03 -1.68 -1.6 -1.46
-1.36 -1.22 -1.37 0.0 -0.18 0.3 -5.48 2.16 1.92 -2.29 -3.74 -3.02 -8.62
-0.02 -0.28 -0.91 0.35 1.39 -0.8 -2.19 1.72 1.32 - -3.52 -3.62 -6.11
-2.01 -1.1 -1.65 0.64 0.7 -2.7 -1.96 1.74 1.77 -0.77 -0.9 -0.99 -
-2.67 -0.88 -3.07 0.16 1.7 -0.57 - 1.86 1.81 - - - -
-0.75 -0.47 -0.72 0.68 0.41 -1.25 -0.14 1.18 1.38 -1.25 -0.99 -1.36 -0.65
-0.31 -0.45 -1.78 0.7 0.92 -0.27 -0.68 1.11 1.51 -1.2 -1.53 -1.57 -3.56
-1.68 -1.62 -2.6 0.61 0.7 -2.78 -0.54 1.58 2.14 -1.98 -4.07 -2.56 -1.56
-2.64 -0.71 -1.59 1.15 1.11 - -0.28 1.55 1.82 - -3.18 -2.95 -
0.13 -0.52 -2.76 0.7 1.38 -0.55 -1.51 0.91 1.55 -1.46 -1.87 -1.48 -
-1.56 -1.74 -1.69 1.15 0.42 -0.67 - 1.81 1.91 -3.33 -3.76 -1.47 -4.16
-2.37 -2.56 -1.43 0.83 0.88 -0.03 -3.2 1.9 1.91 -3.77 - - -
-0.79 -0.62 -1.04 0.38 0.24 -2.15 -0.61 1.7 1.58 -1.28 -1.36 -0.59 -2.29
-1.36 -1.45 -1.85 -0.4 0.29 -1.09 0.04 1.79 1.94 -2.08 -1.88 -1.26 -1.89
-2.86 0.01 -1.24 1.27 1.11 -0.51 -1.39 1.41 1.19 -0.56 -2.97 -4.74 -
-1.18 -0.74 -1.83 0.85 0.75 -0.2 -4.28 1.56 1.94 -1.8 -5.88 -2.51 -
-1.1 -0.85 -1.57 -0.44 0.84 -0.75 -0.41 1.76 2.13 - - - -
-0.49 -0.55 -1.02 1.07 0.59 -0.25 -0.66 1.08 1.47 -1.24 -2.33 -1.31 -2.92
-0.09 -0.82 -0.88 1.2 0.77 -2.28 -2.04 1.54 1.7 -2.69 -3.85 -2.97 -
0.38 -0.47 -1.91 -0.48 1.16 -0.74 -0.04 1.23 1.54 -1.01 -2.09 -2.32 -6.86
-0.18 -0.89 -1.11 0.73 1.36 -1.51 - 1.39 1.78 -1.62 -4.39 -3.12 -
-2.66 -1.19 -1.96 -0.53 0.53 -4.48 -1.79 1.8 2.61 - -3.52 - -
-0.71 -1.21 -1.53 0.48 0.73 -0.72 - 1.31 1.76 -1.21 -1.25 -0.92 -0.52
0.5 -0.49 -1.99 0.43 1.09 -0.46 -0.22 1.15 1.45 -1.97 -2.24 -2.9 -
-0.67 -0.34 -1.44 0.63 1.54 -2.6 -0.39 1.35 1.34 -1.5 - -1.36 -
-0.8 -0.66 -0.97 0.79 1.32 -2.26 -1.29 1.88 1.47 - - - -
0.16 -0.1 -2.5 0.25 1.11 -0.73 -0.84 1.0 1.61 -1.52 -2.72 -1.65 -1.32
-0.17 -0.26 -1.13 1.12 1.04 -0.5 -2.05 1.6 0.95 -1.62 -1.52 - -
-0.92 -1.15 -1.48 0.76 0.94 0.07 -1.21 1.26 1.07 -0.89 -1.43 -0.72 -0.86
-1.42 -1.29 -1.05 1.21 1.04 -0.91 - 1.61 1.81 -3.52 -4.01 -3.96 -3.94
-0.41 -0.81 -1.57 1.07 1.32 -0.69 - 1.46 1.45 -2.49 -3.52 -1.81 -3.55
-0.66 -1.88 -2.21 0.43 -0.01 -1.72 -6.09 1.99 2.17 -2.48 -5.34 -2.27 -1.56
-0.12 -0.98 -1.7 0.36 1.45 -1.03 -3.87 1.69 1.6 -2.22 -2.66 -3.89 -
-0.74 0.58 -1.45 -0.05 -0.6 - -27.95 1.54 2.16 -0.43 -0.4 - -5.63
-0.88 -0.78 -0.98 0.81 0.36 -3.05 -1.97 1.94 2.04 - -7.66 - -
-0.37 -0.19 -2.12 0.93 0.91 -3.2 -1.71 1.52 1.58 -2.6 -2.3 -1.21 -2.01
-0.25 -0.23 -0.98 0.95 0.3 -4.89 -1.33 1.14 1.48 -0.25 -0.51 -0.57 -
-0.6 -1.14 -2.46 0.62 1.21 -1.82 -1.37 1.52 1.59 -1.97 -2.29 -0.24 -
-0.58 -0.95 -2.12 0.53 1.24 -0.64 -2.97 1.46 1.43 -1.4 -1.52 -1.79 -0.9
-0.8 -0.65 -1.78 0.78 1.41 -2.02 -1.46 1.49 1.56 -1.9 -1.53 -2.79 -8.25
0.05 0.02 -0.63 0.92 1.04 -1.52 -1.92 1.59 1.02 -1.32 -2.9 -2.59 -
-1.13 -0.91 -1.07 0.53 0.68 -1.91 -1.4 1.28 1.72 0.14 -1.25 -0.76 -
-1.0 -1.79 -2.71 0.36 0.62 -2.67 -1.93 1.81 1.79 -0.58 -1.37 -1.14 -1.48
-0.9 -1.21 -1.86 0.38 0.7 -1.0 -0.51 1.28 1.31 -0.07 -0.81 -0.19 -1.66
-1.92 -0.87 -1.43 1.03 -0.78 -0.78 -2.69 1.84 1.59 -0.12 -0.67 -1.62 -
-1.19 -0.42 -0.88 0.29 0.75 -2.33 -0.1 1.58 2.02 -3.53 -4.29 -4.43 -
0.12 -1.27 -1.81 0.15 0.36 -2.74 -0.88 1.41 2.18 -1.51 -2.43 -3.13 -1.75
-1.88 -1.53 -1.45 0.25 0.9 -0.78 -0.22 1.9 1.76 -2.95 -3.25 -2.66 -
-0.97 -0.51 -1.28 0.31 0.56 -0.74 0.11 1.61 1.62 -1.32 -2.1 -2.28 -5.52
-1.02 -1.49 -2.07 0.97 1.14 -1.78 - 1.56 2.02 -3.99 -4.04 -1.56 -
-1.37 -0.93 -1.76 -0.04 0.32 -0.8 -0.39 1.86 2.07 -2.79 -2.52 -3.46 -
-0.21 -0.1 -1.07 1.09 0.85 - - 1.64 1.39 -2.35 -2.48 -1.96 -1.21
0.06 -0.44 -1.94 0.06 1.13 -1.88 -1.3 1.06 1.84 -1.39 -1.53 -0.63 -
-0.76 -0.37 -3.2 1.54 1.48 -0.47 -2.2 1.72 0.56 -4.7 -5.01 -4.69 -
-0.52 -0.83 -1.77 0.59 1.52 - - 1.34 2.17 -4.11 - - -
ANJIBAICHA38939 (5PTASE11)
-1.6 -3.52 -2.64 0.47 0.9 -2.01 -0.17 1.91 2.0 -2.66 -5.01 -3.37 -
-1.88 -2.0 -1.73 0.58 0.4 -1.58 -2.29 1.91 2.25 -8.82 -6.56 - -1.81
-0.79 -1.04 -1.82 0.53 0.85 -1.51 -0.13 1.69 1.84 -2.44 -3.53 -3.85 -
-1.23 -2.49 -1.75 0.09 0.3 -0.4 -0.12 1.95 1.98 - -4.76 -1.74 -
-1.41 -1.48 -1.76 0.76 0.82 -0.97 -0.47 1.43 1.72 -1.78 -1.55 -1.73 -1.47
0.4 -0.47 -2.25 -0.2 1.13 -0.0 -0.21 0.99 1.34 -1.29 -1.28 -1.05 -6.68
-0.64 -1.2 -1.15 0.88 1.19 -1.27 - 1.54 1.83 -1.37 -4.73 -6.27 -5.54
-0.53 -1.18 -1.02 1.2 0.55 -1.43 -1.33 1.5 1.58 -1.91 -1.3 -1.49 -
-0.89 -1.18 -1.67 0.94 0.88 -1.76 - 1.47 1.53 -0.34 -1.43 -0.41 -3.87
-0.82 -0.77 -1.41 1.36 1.18 0.43 -0.65 1.19 0.56 -1.85 -1.93 -3.82 -1.76
0.3 0.44 -1.15 0.13 1.31 -1.73 -1.28 1.45 1.18 -2.42 -1.44 -3.55 -5.13
-0.23 0.08 0.18 0.57 -0.78 -1.29 - 1.4 2.16 - -1.5 - -
0.59 -0.38 -1.58 -0.84 0.91 -1.1 -0.16 1.06 1.62 -2.16 -1.46 -1.16 -1.3
-0.47 -2.47 -2.19 0.19 -0.09 0.95 -5.56 1.99 1.69 -1.72 -2.86 -2.16 -
-2.34 -1.57 -1.99 0.64 0.73 -2.37 -0.37 1.85 1.97 -2.62 -3.01 -2.42 -4.42
-2.89 -2.03 -2.96 0.92 0.31 -0.48 -1.67 1.89 1.97 -4.36 -3.83 -0.76 -
-2.39 - - 0.54 0.12 -1.76 -2.16 1.67 2.72 - - - -
-0.78 -0.98 -1.18 1.02 0.58 -0.29 -9.43 1.5 1.37 -1.2 -1.61 -1.14 -0.98
-0.82 -1.38 -1.6 0.17 -0.73 0.35 - 1.84 1.81 -1.08 -2.11 -0.21 -4.14
-0.43 -0.7 -1.68 0.27 0.68 0.06 -1.73 1.67 1.29 -1.36 -1.65 -1.02 -1.55
-0.66 -1.22 -2.02 0.13 0.59 -1.57 -0.29 1.71 1.65 -1.51 -1.59 -1.1 -1.4
-0.7 -0.72 -1.27 0.9 1.0 -0.93 -0.64 1.27 1.59 -1.97 -1.2 -2.5 -4.39
-0.83 -0.74 -1.13 0.0 -0.42 -1.75 -2.14 2.06 2.27 -5.67 - -3.19 -
-0.92 -0.01 -0.43 0.57 1.3 -2.5 -1.58 1.63 1.55 -6.24 - - -2.01
-0.3 -0.22 -0.62 0.81 1.28 -5.86 -3.82 1.7 0.99 -1.81 -1.67 -0.84 -7.15
-0.62 -0.69 -1.03 0.27 0.73 -1.65 -1.13 1.91 1.6 -2.34 -4.63 -0.82 -
-1.16 -0.18 -0.28 0.2 0.84 -0.99 -0.24 1.75 1.47 -2.8 -2.04 -4.24 -
-0.16 -0.73 -0.99 0.91 0.29 0.04 -1.15 1.22 1.93 -2.61 -2.99 - -
-0.61 -0.35 -1.2 0.79 1.2 -0.46 -0.68 1.32 1.34 -2.41 -2.3 -1.59 -
-0.04 -0.15 -1.08 0.85 1.12 -0.99 -0.94 1.03 1.56 -2.15 -2.5 -1.94 -
-2.21 -2.24 -2.11 -0.93 -0.03 0.47 -3.59 2.38 1.92 -2.64 -4.75 -2.34 -
-0.28 -0.14 -0.04 -0.04 0.26 -3.86 -2.76 1.38 1.71 -0.26 -0.3 -1.37 -
-0.04 -0.52 -0.9 0.09 -0.43 -1.89 -1.96 2.08 2.04 -5.22 -6.12 -3.92 -
0.7 -0.29 -2.11 -1.38 1.16 -1.92 -0.9 1.12 2.07 -3.75 -3.33 -2.26 -2.74
-1.08 -1.59 -1.57 0.5 0.78 -2.72 -0.16 1.67 2.01 -2.97 -4.04 -2.38 -3.47
-0.9 -1.91 -0.34 0.61 1.56 -4.41 - 1.61 1.94 - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.