Heatmap: Cluster_188 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
root,3-year-old,no treatment
root,3-year-old,ammonium treatment
leaf,3-year-old,no treatment
leaf,3-year-old,ammonium treatment
pistil,10-year-old,no treatment
old leaf,4-year-old,no treatment
fourth leaf,4-year-old,no treatment
third leaf,4-year-old,no treatment
second leaf,4-year-old,no treatment
one leaf and a bud,4-year-old,no treatment
leaf,9-year-old,no treatment
two leaves and a bud,missing,no treatment
trichome,missing,no treatment
root,missing,no treatment
stem,missing,no treatment
leaf,missing,no treatment
second leaf,missing,no treatment
lateral root,high nitrogen (2.5 mM)
lateral root,control (1 mM)
lateral root,low nitrogen (0.25 mM)
lateral root,high nitrogen(2.5 mM),IBA(0.4 mM)
lateral root,low nitrogen(0.25 mM),NPA(20 uM)
shoot,missing,control
root,missing,organic nitrogen treatment
root,missing,high nitrogen treatment
root,missing,low nitrogen treatment
shoot,missing,organic nitrogen treatment
shoot,missing,high nitrogen treatment
shoot,missing,low nitrogen treatment
root,missing,control
mix nine tissues,no treatment
root,2-year-old,As treatment
root,2-year-old,Cd treatment
root,2-year-old,no treatment
-1.19 -0.77 0.02 -0.42 -0.5 -0.47 -0.2 -0.19 0.28 0.51 0.47 0.61 0.14 -0.27 0.56 -0.62 0.84 -0.74 -0.88 -0.56 -1.15 -0.8 -0.24 -0.38 -0.24 -0.29 -0.38 -0.21 -0.58 -0.31 2.54 -0.99 -0.87 -0.86
-0.6 0.1 0.14 -0.01 0.21 0.11 -0.14 -0.15 0.11 0.32 0.12 1.28 0.52 0.09 0.66 0.75 -2.53 -0.6 -0.96 -0.64 -2.33 -0.86 -0.3 -0.05 -0.22 -0.39 -0.93 -0.51 -1.15 -0.34 2.04 -0.73 -0.42 -1.08
-2.85 -1.57 -0.95 0.25 -0.4 -0.57 0.14 0.56 0.48 0.75 0.64 2.48 1.02 -0.79 -0.33 0.32 -2.48 -1.27 -1.47 -0.76 -1.53 -2.1 -1.54 -1.83 -1.84 -1.97 -1.35 -1.01 -2.93 -1.71 2.8 -1.06 -0.4 -3.1
-0.57 -0.39 0.45 -0.24 -0.22 0.16 -0.22 0.24 0.2 0.27 0.72 1.63 0.87 -0.47 0.05 0.45 -1.9 -0.43 -1.06 -1.94 -1.83 -3.13 0.72 -0.24 0.01 -0.13 0.12 0.3 -0.2 -0.28 1.02 -1.01 -0.52 -0.97
- -0.66 - -0.06 -1.5 -3.35 -2.38 0.23 0.57 1.65 -0.01 2.99 1.49 0.58 -1.54 -2.33 -1.54 -2.77 -2.72 -3.0 - -3.73 -0.13 -0.34 -0.12 -0.94 -3.2 -2.81 -1.61 -1.74 2.73 -2.34 -3.26 -1.24
0.2 - -0.09 - 1.03 -2.64 -2.67 -0.28 0.32 0.9 -0.54 1.55 1.31 -0.91 -1.18 -1.66 -1.94 -0.7 -0.45 -0.57 -3.5 -1.94 -1.07 -0.76 0.12 0.16 -2.28 -1.5 -1.86 -2.06 3.36 -4.01 -1.29 -0.99
-0.73 -1.21 0.81 0.12 0.83 -1.32 -1.9 -0.62 0.55 1.16 0.77 1.55 0.76 -0.0 0.26 -1.18 -0.96 -1.3 -1.01 -1.15 -2.14 -1.72 -0.77 -0.25 -0.03 -0.13 -1.09 -1.3 -1.41 0.0 2.31 -1.82 -0.53 -1.11
- -2.63 0.02 0.07 -0.93 -2.82 -1.16 -0.16 0.06 0.04 -0.25 2.36 1.31 -3.02 0.05 -0.34 1.23 - - - - - -4.25 -4.95 - - -1.3 -2.25 -2.59 - 3.81 -4.49 - -
-1.72 1.1 -1.52 0.63 -0.68 0.13 0.22 0.72 -0.28 0.64 0.24 2.01 0.72 -1.09 -3.15 -0.15 -1.89 -3.01 -1.41 -1.29 -3.0 -3.01 -0.01 -0.0 -1.95 -0.93 -0.97 -0.5 -1.38 -2.92 2.76 -1.56 -0.61 -0.53
-0.16 0.4 -0.09 -0.35 -0.1 -0.16 0.23 0.24 0.22 0.36 0.08 0.47 -0.13 -0.03 0.06 -0.16 -0.59 -0.11 -0.45 -0.29 -1.67 -0.04 -0.03 0.07 0.3 0.13 -0.26 -0.05 -0.34 0.15 1.27 -0.33 -0.38 -0.53
-1.66 -1.43 -1.01 0.15 -0.43 -1.42 -0.39 -0.32 0.65 1.47 -0.16 2.83 1.29 -1.07 -0.23 0.1 - - -5.59 -3.34 - - -1.35 -1.69 -0.33 -0.81 -1.84 -1.98 -3.76 -1.01 2.91 -1.82 -0.42 -
-1.95 -1.1 0.34 -0.03 -0.12 -0.16 -0.38 0.24 0.85 1.17 0.63 1.67 1.24 -0.11 0.42 -0.39 -1.81 -0.93 -0.79 -0.6 -3.28 -1.3 -0.39 -0.66 -0.6 -0.37 -0.48 -0.28 -0.82 -0.51 1.95 -1.94 -0.93 -2.02
0.62 -1.73 -0.0 -0.63 0.81 0.83 -0.07 -0.19 0.92 0.23 -0.53 0.93 0.07 0.35 -0.71 -0.5 -5.07 -0.78 0.41 0.35 0.12 -1.08 -0.97 -0.93 -1.09 -1.49 -1.86 -1.24 -3.41 -0.42 2.86 -3.94 -2.24 -3.01
-0.33 -0.15 -1.16 -0.63 0.27 -0.46 0.26 0.51 0.28 0.34 0.58 1.45 0.56 -0.5 0.26 0.4 -0.74 -0.96 -2.94 -0.88 -2.09 -1.76 0.17 -0.54 -0.47 -0.35 -0.51 0.02 -0.45 -0.19 2.16 -0.59 -0.79 -0.78
-3.84 -4.02 -2.13 -1.14 -1.12 0.08 -0.03 0.56 0.51 0.89 1.48 2.42 1.7 -1.66 0.59 0.24 -4.04 -6.27 -5.69 -4.52 -3.63 -3.28 -2.16 -3.5 -4.02 -2.36 -4.3 -1.77 - -3.7 3.15 -1.62 -0.57 -1.54
-1.43 -0.84 0.46 0.19 -1.55 -0.59 -1.5 -0.08 0.74 1.6 0.79 2.47 1.2 -0.24 0.01 0.03 -1.61 -1.34 -3.84 -2.1 -5.93 -3.52 -0.54 -0.75 -0.71 -1.03 -1.39 -1.15 -1.6 -1.66 2.26 -1.47 -0.49 -1.93
- -0.75 0.01 0.04 -1.49 -0.85 0.24 0.8 1.5 1.31 0.72 2.45 1.05 -0.77 -1.4 -0.03 -1.45 -4.8 -4.11 -2.53 - -3.55 -1.44 -1.42 -1.97 -0.43 -0.98 -0.24 -0.18 -2.04 2.38 -2.52 -1.69 -1.1
-1.56 -1.08 0.16 0.14 -0.47 0.18 0.18 0.43 0.71 1.12 0.71 1.57 0.82 0.14 0.41 0.07 -1.35 -1.66 -1.39 -1.34 -2.13 -1.95 0.12 -0.76 -0.39 -0.6 -1.24 0.01 -1.13 -0.35 1.86 -1.09 -0.8 -0.86
-0.64 -2.05 -0.34 -1.38 -0.42 -0.64 -0.34 0.29 0.33 0.2 0.04 2.11 0.45 -1.96 -0.24 -0.01 -1.74 -3.73 -3.75 -2.1 - -2.51 -0.69 -2.31 -0.23 -0.91 -1.16 - 0.58 -1.54 3.39 -1.2 -0.39 -1.83
-1.02 -0.43 -1.26 -0.78 -0.36 -0.03 0.48 0.71 0.69 0.68 0.8 1.24 0.8 -0.2 0.5 -0.12 -0.89 -1.64 -1.95 -0.92 -3.65 -1.52 -0.32 -0.7 -0.55 -0.36 -0.64 -0.03 -1.92 0.02 2.45 -1.48 -0.67 -1.34
0.83 -0.74 -0.26 0.53 -0.7 -0.65 0.29 0.74 -0.06 0.66 0.77 1.83 1.11 0.41 -0.98 0.02 -1.01 -3.25 - -2.98 - - 0.47 0.09 -0.17 0.62 0.05 0.27 -0.97 0.15 -1.03 -0.59 -0.13 -0.17
-0.44 -0.54 -0.27 -0.22 -0.44 -0.29 -0.28 0.36 0.35 0.62 0.47 1.07 0.63 0.27 0.98 0.44 -1.77 -0.72 -0.17 -0.34 0.24 -0.98 -1.46 -0.98 -0.38 -0.42 -1.54 -1.28 -1.31 -0.81 2.04 -0.55 0.04 -0.66
-0.18 0.05 -0.02 -0.41 -0.29 -0.32 -0.44 -0.08 -0.03 0.16 0.38 1.57 1.1 0.04 0.65 0.09 -0.98 -1.14 -1.34 -0.85 -1.67 -1.78 -0.25 -0.7 -0.72 -0.61 -0.49 -0.31 -1.07 -0.22 2.15 -0.62 0.22 -0.98
-0.52 -0.36 -0.32 -0.65 -0.56 -0.34 0.23 0.49 0.62 0.54 0.51 1.52 1.24 -0.11 0.17 -0.15 -1.22 -1.98 -2.39 -1.09 -3.67 -2.38 0.0 -0.32 -0.2 -0.35 -0.67 -0.05 -0.99 0.09 2.3 -1.08 -0.76 -2.22
-1.3 -1.32 0.15 -0.85 -1.94 -0.74 0.15 -0.64 0.23 0.46 1.04 1.24 -0.21 0.37 1.6 -0.04 1.1 -3.37 -8.01 -3.16 -2.98 -2.9 -1.52 -1.85 -1.26 -1.33 -2.16 -1.46 -2.25 -1.08 3.16 -1.19 -0.44 -1.51
-1.75 - 1.87 1.15 -0.2 -1.49 -3.41 -2.89 -0.37 0.19 0.59 1.84 0.61 -3.2 -0.7 -0.89 -14.99 -19.17 -2.11 -1.44 -2.39 -0.43 -12.69 -0.4 -0.81 -0.14 -13.06 -2.45 -0.91 -1.35 3.49 -4.13 -1.3 -18.52
-0.63 0.03 0.08 -0.27 0.21 -0.48 0.1 0.22 0.27 0.34 0.32 0.99 0.48 0.22 0.15 -0.05 -0.44 -0.61 -0.92 -0.46 -2.29 -0.82 -0.13 0.04 0.27 0.11 -0.46 0.25 -0.83 0.08 1.77 -1.08 -1.09 -1.14
-0.54 0.01 0.23 0.14 0.3 0.94 0.7 0.24 0.64 0.92 -0.09 2.32 2.02 -0.03 0.02 1.09 -2.0 -2.39 -3.64 -4.26 - -1.37 0.08 -2.67 -1.77 -2.11 -1.56 -0.25 -1.25 -2.37 -1.06 -1.44 -0.23 -1.58
0.68 -3.56 -0.87 -3.1 0.14 -0.89 0.87 1.09 0.55 1.02 1.32 1.59 0.86 0.01 0.22 -0.67 -0.94 -3.51 -4.98 -2.81 -2.55 -3.08 -0.34 -1.09 -1.32 -0.93 -0.92 -0.0 -1.23 -0.38 2.54 -1.99 -2.53 -2.1
FUDINGDABAI41515 (EMB2780)
-1.04 -0.61 0.24 -0.18 0.04 -0.17 -0.38 0.16 0.76 1.08 0.3 1.31 0.77 0.21 0.53 -0.12 -1.48 -0.6 -1.07 -0.4 -1.31 -1.51 -0.15 -0.24 -0.09 -0.26 -0.48 -0.13 -0.63 -0.24 1.63 -1.29 -0.65 -1.13
-1.27 0.04 -1.46 -0.38 0.69 -1.48 -0.69 -0.85 -0.08 0.89 -0.18 2.15 1.09 -3.0 -0.58 -1.45 -3.99 -1.04 -1.84 -0.6 -2.77 -3.41 -0.62 -1.74 -1.04 -0.35 -2.52 -3.18 -0.93 -1.27 3.42 -2.59 -0.29 -
-0.66 0.09 -1.91 -1.57 0.59 -0.69 0.2 0.94 0.6 0.87 0.16 1.51 0.66 0.31 0.26 -0.71 -2.66 -2.09 -0.51 -1.55 -0.08 -2.54 -0.51 -2.21 -0.97 -2.01 -2.34 -2.91 -4.55 -1.67 2.91 -0.93 0.09 -0.88
1.7 -1.94 -0.8 -1.68 0.04 -1.5 0.79 0.69 0.65 0.82 1.04 1.26 0.45 0.45 -0.05 -1.1 -0.24 -1.81 -2.21 -1.06 -1.65 -1.81 0.3 -0.77 -0.59 -0.27 -0.68 -0.15 -0.75 -0.24 1.53 -1.52 -1.4 -0.75
-0.14 0.25 -2.76 0.34 -0.46 -0.73 0.74 0.52 0.4 0.83 0.65 1.53 0.48 0.22 -0.72 0.39 0.78 -4.03 -1.36 -0.96 -3.22 -2.43 -0.14 -2.44 -2.13 -1.16 -0.79 -0.27 -1.5 -0.14 2.29 -0.81 -1.02 -0.58
-0.67 0.43 0.21 0.18 0.39 -0.63 0.46 0.67 0.55 0.54 0.11 0.63 0.25 0.13 0.15 0.14 -0.71 -0.51 -0.78 -0.13 -1.06 -0.51 -0.39 -0.43 -0.28 -0.33 -0.44 -0.33 -0.87 -0.31 1.32 -0.39 -0.27 -0.55
-0.23 0.22 0.05 0.01 0.31 -1.07 0.24 0.4 0.37 0.09 0.14 0.82 0.26 0.24 0.06 0.21 -0.64 -0.37 -0.84 -0.41 -0.85 -0.79 -0.2 -0.39 -0.18 -0.16 -0.14 -0.39 -0.58 -0.29 1.67 -0.43 -0.07 -0.66
-0.75 -0.55 1.15 0.98 -2.94 -2.64 -0.99 -0.15 0.84 1.2 0.24 1.36 1.38 -0.02 1.18 -0.26 -1.3 -1.13 -0.6 -1.08 -2.92 -0.8 -0.11 -0.84 -0.37 -0.53 -0.52 -0.5 -0.55 -0.81 1.52 -2.04 -1.17 -1.22
-0.63 -0.62 0.54 0.34 0.07 -1.24 -0.51 -0.04 0.38 0.79 0.29 1.53 0.44 0.19 0.21 0.04 -0.42 -0.94 -1.37 -0.96 -1.62 -1.41 -0.5 -0.27 -0.15 -0.26 -0.67 -0.59 -0.99 -0.15 1.99 -0.62 -0.15 -0.6
-4.75 -2.48 0.66 0.3 0.07 - -1.14 0.49 0.97 1.51 0.09 2.8 1.62 -6.2 -3.59 -3.08 -2.84 -2.17 -1.39 -2.79 0.66 -3.01 -1.23 -3.65 -2.5 -3.34 -1.06 -1.21 -1.79 -2.96 2.85 -5.62 - -
-0.09 -0.54 0.59 0.33 -0.78 0.05 0.25 0.21 0.19 0.38 0.41 0.43 -0.22 0.33 0.37 0.16 0.33 -0.74 -0.94 -0.51 -1.79 -0.91 -0.29 -0.15 -0.02 -0.02 -0.5 -0.24 -0.75 0.1 1.54 -0.42 -0.65 -0.15
- -2.85 1.26 0.27 -0.15 -0.69 1.19 0.61 -0.19 0.7 -0.03 1.85 0.29 -0.09 -0.31 -0.42 0.65 - -5.23 -3.9 - -1.16 -1.34 -1.77 -2.58 -1.33 -1.17 -2.14 -1.4 -1.9 2.97 -1.12 -2.52 -0.08
-1.1 - 0.12 -0.21 -0.74 -0.41 0.42 0.55 0.82 1.09 0.92 1.85 1.04 -4.1 -0.58 0.43 -2.02 -1.61 -0.6 -1.13 -1.33 -1.75 0.3 -0.5 -1.03 -0.4 0.6 0.91 -1.51 -0.87 1.81 -3.08 -2.49 -1.98
-0.92 -1.34 -0.41 -0.21 -0.29 0.0 0.2 0.1 -0.05 -0.1 0.43 1.0 -0.35 0.38 0.76 -0.24 0.73 -1.66 -1.3 -0.13 -1.82 -1.11 0.11 -1.15 -1.08 -0.77 -0.2 0.24 -0.33 -1.25 2.63 -1.13 -0.68 -1.37
-0.79 -2.53 0.98 0.32 0.63 -0.41 -0.48 -0.4 0.37 0.96 1.16 1.32 1.13 -0.06 0.54 -0.94 -0.91 -2.03 -2.34 -1.39 -3.94 -2.79 -0.05 -0.94 -0.53 -0.7 -0.31 -0.03 -0.69 -0.37 2.16 -2.43 -0.8 -1.31
-2.06 - 0.78 0.46 0.56 -0.93 -2.6 -0.59 -0.19 0.18 0.55 2.17 0.89 0.03 -3.15 - -4.2 -1.55 -2.19 -2.03 -1.22 -1.88 -1.45 -0.44 -0.66 -1.75 - -1.81 -0.42 -2.04 3.44 -1.86 -1.43 -0.98
-1.43 0.65 -0.25 -0.14 0.06 0.41 0.33 0.49 0.64 0.82 0.67 2.03 1.24 -0.3 0.11 0.55 -2.13 -1.62 -3.27 -3.66 -2.94 -1.8 0.19 -0.84 -0.67 -0.42 -0.92 -0.38 -1.26 -0.53 1.38 -1.55 -0.43 -1.99
-1.25 -2.27 -0.17 -0.13 1.0 -0.33 0.54 -0.17 0.56 0.48 -1.37 1.58 0.62 -0.22 0.63 0.61 -2.18 -0.13 -1.38 -1.07 - 0.38 -2.15 -2.71 -1.55 -2.28 -1.08 -1.67 -2.01 -2.35 3.1 -4.12 -4.12 -0.87
-3.34 -1.04 0.67 -0.03 0.35 -0.27 0.25 0.9 0.79 0.86 1.46 1.88 0.63 -0.44 0.35 0.65 -0.86 -0.73 -3.2 -1.51 -3.51 -2.31 0.2 -1.57 -0.36 -0.15 0.12 0.47 -0.87 -0.37 -0.19 -3.09 -0.87 -2.38
-1.34 -1.36 0.66 0.86 0.19 0.13 0.46 1.13 1.01 1.13 1.23 1.59 0.92 -1.49 -0.34 0.03 -1.03 -0.03 -0.94 -1.01 -2.0 -2.08 -0.07 -1.48 -0.46 -1.32 -0.72 0.24 -0.41 -0.33 -2.6 -1.87 -0.53 -0.85
-2.6 -2.62 1.0 0.26 0.38 -0.46 -0.23 0.91 0.9 1.01 0.81 1.8 0.65 -0.2 0.53 0.44 -1.19 -1.1 -3.1 -1.85 -3.44 -3.85 0.07 -1.67 -1.15 -0.87 -0.22 0.39 -0.72 -0.08 1.39 -1.41 -0.58 -2.55
-1.0 -1.03 -0.01 0.2 -1.24 0.66 0.3 0.92 0.9 1.02 0.36 2.15 1.48 -1.11 -1.04 0.52 -2.73 -2.05 -2.76 -1.6 -2.74 -2.77 -0.46 -1.37 -0.51 -0.99 -0.74 0.32 -0.19 -1.09 1.94 -2.6 -2.4 -3.96
-1.12 0.45 -0.72 -0.53 0.07 -0.12 -0.06 0.09 0.52 1.08 0.9 1.63 1.61 -0.52 -0.91 0.04 -1.72 -1.29 -1.66 -3.31 - -4.83 0.86 -0.74 -0.03 -0.35 -0.96 0.71 -0.76 0.63 1.24 -1.59 -2.0 -1.05
-0.49 -2.19 1.01 0.89 -0.89 -0.8 -0.88 0.03 0.62 1.49 0.51 1.4 0.85 0.36 0.74 0.48 -1.55 -0.73 -0.53 -0.58 -2.2 -0.93 -1.8 -0.42 -0.26 -0.3 -1.22 -1.59 -1.65 -0.08 1.8 -3.02 -1.73 -1.7
- 0.31 -0.39 -1.97 -0.13 1.54 0.2 0.31 1.4 0.62 1.35 2.31 1.91 0.5 1.24 0.85 - -3.39 - -2.08 -1.11 -2.43 -0.75 -0.85 -2.36 -3.14 -1.7 -2.3 -3.25 -2.18 - -1.22 -0.37 -
-0.26 -0.59 -0.01 0.37 -0.94 0.11 0.13 0.06 0.18 0.45 0.26 1.81 1.42 -0.2 -0.43 0.17 -0.6 -0.94 0.07 -0.3 -1.06 -0.38 -0.16 -0.92 0.01 -1.24 -0.13 0.37 -0.88 -0.57 1.14 -1.88 -1.02 -1.54
- -1.99 0.41 1.24 -0.55 - - -0.98 0.56 1.49 -2.49 2.7 0.66 -1.33 - - -5.86 -1.39 -2.2 - - - -1.08 - -3.04 - - -6.76 - -0.53 3.8 - -3.44 -
FUDINGDABAI58967 (EMB2754)
-0.86 0.2 -0.04 -0.09 -0.48 -0.3 0.86 0.48 0.89 0.17 0.38 2.08 1.19 -1.25 -1.13 -1.72 -0.79 - - - -3.7 -1.17 0.95 -2.2 -1.66 -1.2 -0.75 -0.35 -0.82 -0.21 2.63 -2.7 -0.88 -
-1.49 -2.12 -0.67 -1.06 -0.68 -0.6 -0.87 0.13 0.02 0.68 -0.01 1.74 -0.58 0.54 1.19 -0.25 -0.93 -2.9 -2.44 -1.31 -2.14 -2.28 -1.31 -0.62 -2.2 -0.34 -1.99 -0.08 -1.7 -1.93 3.23 -0.03 -0.21 -1.13
-1.92 -1.21 -1.42 -2.38 0.43 -0.15 0.25 0.35 -0.28 0.58 0.39 1.58 1.57 -0.19 0.46 0.75 -2.16 -1.39 -1.28 -3.44 -2.68 -1.28 -1.12 -1.64 -1.22 -1.03 -1.43 -0.94 -1.71 -0.43 2.71 -0.42 -0.09 -0.1

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.