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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | second leaf,natural sun/80% shade | third leaf,2-year-old,no treatment | third leaf,2-year-old,shade treatment | fourth leaf,10-year-old,no treatment | fourth leaf,10-year-old,shading treatment | two leaves and a bud,blue light 15d | two leaves and a bud,blue/red (1:1) light 15d | two leaves and a bud,red light 15d | two leaves and a bud,white light 15d | second leaf,missing,no treatment | leaf,missing,no treatment | two leaves and a bud,missing,no treatment | tender leaf,red/white (2:3) light 10d | tender leaf,white light 10d |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -0.38 | 1.38 | 1.29 | 0.01 | 1.02 | -3.09 | -2.36 | -2.54 | -2.51 | -0.26 | -0.07 | -1.02 | 0.24 | 0.04 | |
| -0.69 | 2.28 | 1.59 | -1.72 | -1.44 | -2.46 | -0.95 | -1.65 | -1.0 | -0.62 | -0.11 | -0.47 | -0.69 | -1.31 | |
| -2.26 | 1.66 | 0.44 | 1.26 | 1.97 | - | - | - | -1.43 | 0.38 | -1.61 | -0.02 | - | - | |
HUANGJINYA02045 (UBC10) | -0.5 | 1.34 | 0.69 | -0.45 | -0.52 | -0.43 | -0.04 | 0.17 | -0.19 | -0.46 | -0.51 | -0.72 | -0.16 | 0.09 |
| -0.9 | 1.5 | 1.11 | -0.09 | 0.68 | -0.62 | -0.75 | -0.56 | -0.65 | -0.86 | -0.52 | -1.03 | -0.35 | -0.2 | |
| -0.62 | 1.24 | 0.44 | 0.33 | 1.18 | -1.07 | 0.31 | -0.46 | 0.23 | -1.01 | -0.98 | -0.65 | -1.13 | -1.32 | |
HUANGJINYA05554 (AOC3) | -1.75 | 1.63 | 0.89 | 0.31 | 2.24 | -3.4 | -2.36 | -0.23 | -3.3 | -1.6 | -0.21 | -4.36 | -2.98 | -2.49 |
| -0.45 | 1.37 | 0.5 | 0.12 | -0.89 | -0.34 | 0.16 | 0.24 | 0.19 | -0.74 | -1.0 | -0.19 | -0.53 | -0.46 | |
| -0.73 | 1.24 | 0.16 | 0.16 | 0.25 | -0.28 | -0.19 | 0.24 | -0.31 | -0.83 | -0.51 | 0.1 | -0.42 | -0.23 | |
HUANGJINYA06875 (ABP) | -0.12 | 1.04 | 0.6 | 0.15 | -0.55 | -0.48 | 0.06 | -0.0 | 0.17 | -0.48 | -0.52 | -0.36 | -0.31 | -0.29 |
| -2.89 | 1.97 | 1.85 | -0.28 | 1.12 | 1.55 | - | - | - | -1.25 | - | - | - | - | |
| -3.13 | 2.75 | 1.94 | -0.54 | 0.01 | -2.72 | -5.21 | -4.02 | -5.08 | -0.16 | -4.6 | -1.86 | -4.09 | -3.74 | |
HUANGJINYA07771 (UBC5) | -0.31 | 1.17 | 0.52 | 0.04 | -0.6 | -0.34 | 0.03 | -0.39 | -0.18 | -0.44 | -0.06 | 0.18 | -0.38 | -0.37 |
| -0.56 | 1.67 | 1.24 | 0.35 | 1.88 | -4.94 | - | -4.86 | -3.85 | 0.51 | -3.27 | -0.4 | -2.41 | -2.27 | |
| -1.43 | 1.79 | 1.67 | -1.18 | -0.8 | -0.98 | -0.23 | -0.02 | -0.15 | -0.5 | -1.85 | -0.14 | -1.34 | -1.17 | |
| -0.73 | 1.1 | 0.65 | 0.21 | -0.13 | -0.22 | 0.05 | 0.1 | -0.3 | -0.35 | -0.7 | -0.73 | -0.17 | -0.09 | |
HUANGJINYA09699 (TIM10) | -1.44 | 2.02 | 1.22 | -0.25 | 0.02 | -1.15 | -1.67 | -1.73 | -1.31 | -0.41 | -0.17 | -0.2 | -0.48 | -0.53 |
| -1.86 | 1.74 | 1.18 | 0.5 | 0.49 | -0.4 | 0.11 | 0.96 | -0.33 | -1.4 | -4.02 | -3.05 | -4.09 | -3.52 | |
HUANGJINYA10364 (ERF4) | -5.53 | 2.79 | 2.49 | -1.77 | -1.5 | -4.03 | -4.92 | -4.18 | -4.64 | -1.39 | -2.69 | -11.07 | -4.59 | -4.06 |
| -1.69 | 2.28 | 1.69 | -0.93 | 0.71 | -2.16 | -4.52 | -3.62 | -4.25 | 0.73 | -4.03 | -1.61 | -1.17 | -0.81 | |
| -0.93 | 1.7 | 1.17 | -0.07 | 1.09 | -4.6 | -3.92 | -3.21 | -4.53 | 0.19 | -1.68 | -2.1 | 0.35 | 0.74 | |
| -0.7 | 1.28 | 0.72 | -0.36 | -0.42 | 0.03 | 0.32 | 0.32 | -0.2 | -0.63 | -1.16 | -0.49 | -0.36 | -0.29 | |
| -0.49 | 1.53 | 1.45 | -0.26 | 1.22 | -0.8 | -0.85 | -0.3 | -0.95 | -0.51 | -1.07 | -1.82 | -1.7 | -1.87 | |
| -0.4 | 1.46 | 0.67 | -0.15 | -0.08 | -0.9 | -0.14 | -0.13 | -0.19 | -0.79 | -0.18 | -0.73 | -0.17 | -0.21 | |
HUANGJINYA12633 (ERF4) | -2.19 | 1.76 | 1.64 | 0.36 | 1.47 | -1.25 | -3.33 | -2.92 | -3.27 | 0.31 | -1.95 | -0.22 | -5.25 | -3.62 |
| -0.25 | 1.03 | 0.71 | -0.24 | -0.72 | 0.03 | 0.03 | -0.11 | 0.01 | -0.08 | -0.62 | 0.45 | -0.82 | -0.91 | |
HUANGJINYA13096 (AGL64) | -0.97 | 1.54 | 0.88 | 0.07 | 0.65 | -0.74 | -1.1 | -0.33 | -1.26 | -0.24 | -0.35 | -0.23 | -0.65 | -0.5 |
| -0.49 | 0.73 | 0.52 | -0.24 | 0.19 | 0.44 | 0.06 | 0.48 | 0.13 | -0.24 | -1.0 | -1.0 | -0.51 | -0.38 | |
| -2.78 | 2.76 | 1.68 | -1.66 | 0.56 | -1.71 | -3.81 | -3.31 | -4.07 | 0.33 | -3.61 | -3.42 | -4.6 | -3.82 | |
HUANGJINYA14629 (ERF-1) | -2.4 | 1.48 | 1.12 | 0.83 | 2.09 | -1.04 | -3.67 | -1.59 | -4.24 | 0.22 | -3.29 | -1.92 | -3.36 | -2.17 |
| -3.94 | 1.8 | 0.45 | 2.04 | 1.66 | -6.26 | -2.6 | 0.1 | -2.12 | -3.66 | -7.15 | -2.12 | -8.2 | -6.67 | |
| -0.77 | 0.85 | 0.29 | 1.45 | 2.06 | -0.99 | - | -0.93 | - | -1.2 | - | -1.39 | -0.7 | 0.05 | |
HUANGJINYA16635 (HDG2) | -1.41 | 1.94 | 2.13 | -0.72 | 1.09 | -3.29 | - | -3.22 | -2.22 | -1.8 | -2.41 | - | 0.0 | -0.36 |
HUANGJINYA18848 (ERF2) | -3.45 | 1.65 | 1.19 | 1.05 | 1.96 | -0.38 | -2.3 | -0.21 | -2.14 | -1.46 | -4.24 | - | - | -5.51 |
HUANGJINYA18849 (ERF-1) | -3.93 | 2.51 | 1.46 | 0.56 | 1.36 | -4.13 | -4.96 | -3.63 | -5.88 | -0.05 | -2.68 | -3.86 | -5.45 | -4.38 |
HUANGJINYA18850 (ERF-1) | -3.03 | 1.46 | 0.88 | 1.36 | 2.06 | -0.49 | -1.48 | -0.35 | -2.02 | -1.44 | - | -4.66 | -5.27 | -6.43 |
HUANGJINYA18946 (PEX4) | -0.16 | 0.81 | 0.38 | -0.26 | -0.28 | -0.42 | 0.07 | -0.09 | -0.04 | -0.1 | -0.21 | 0.16 | -0.2 | -0.17 |
HUANGJINYA19719 (GLB3) | -5.38 | 2.81 | 1.88 | 0.03 | 0.08 | - | -6.01 | - | -4.47 | -0.0 | -5.92 | -3.38 | -7.09 | -7.3 |
| -0.7 | 0.64 | 0.8 | 0.13 | 0.55 | -0.34 | 0.53 | 0.28 | 0.61 | -0.96 | -0.92 | -0.79 | -1.03 | -1.19 | |
HUANGJINYA20597 (NLP7) | -1.23 | 1.76 | -0.25 | 1.94 | 1.72 | -2.89 | - | - | -1.71 | -3.51 | -0.32 | - | -1.53 | -0.81 |
| -1.38 | 1.26 | 0.98 | 1.04 | 2.08 | -3.3 | - | - | - | -1.37 | -3.25 | 0.74 | -2.52 | -0.94 | |
HUANGJINYA22037 (CAM3) | -0.45 | 1.31 | 1.46 | 0.58 | 0.89 | -1.34 | -0.84 | -0.77 | -0.87 | -0.98 | -0.73 | -1.12 | -0.8 | -1.12 |
| -0.42 | 1.39 | 1.27 | -0.63 | -1.5 | -1.14 | 0.21 | 0.18 | 0.18 | -1.37 | 0.18 | -0.33 | -1.11 | -0.84 | |
| -0.63 | 1.35 | 1.6 | 0.22 | 1.09 | -1.52 | -1.6 | -1.26 | -1.47 | -0.07 | 0.18 | -3.3 | -1.2 | -1.31 | |
HUANGJINYA25911 (NRP1) | -0.72 | 1.33 | 0.7 | 0.02 | 0.62 | -0.66 | -0.72 | -0.36 | -0.95 | 0.18 | 0.08 | -0.36 | -0.75 | -0.75 |
| -0.8 | 1.6 | 0.79 | 0.13 | 0.12 | -0.27 | -0.05 | 0.53 | -0.19 | -0.61 | -1.38 | -1.24 | -1.14 | -1.2 | |
| -1.03 | 2.41 | 1.7 | -1.88 | -1.99 | -2.75 | -0.92 | -1.52 | -1.03 | -1.02 | -1.12 | 0.8 | -3.1 | -3.58 | |
| -2.88 | 2.53 | 1.93 | 0.02 | 0.26 | -1.9 | - | -5.01 | - | 0.39 | - | -3.58 | -2.49 | -2.2 | |
| -0.65 | 2.29 | 1.59 | - | 0.8 | -1.83 | - | 0.24 | -1.75 | 0.97 | - | - | - | - | |
| -3.98 | 1.94 | 0.83 | 0.9 | 1.89 | -2.35 | -0.8 | -0.28 | -0.95 | -1.21 | -4.28 | -4.27 | -4.84 | -3.8 | |
| -0.52 | 1.06 | 0.5 | 0.2 | 0.33 | -0.77 | 0.14 | -0.08 | 0.21 | -0.91 | -0.92 | -0.07 | -0.25 | -0.39 | |
| -0.45 | 1.0 | 1.23 | 0.4 | 0.54 | -1.74 | -0.58 | -0.61 | -0.61 | -0.43 | 0.24 | -0.73 | -0.41 | -0.77 | |
| -1.16 | 1.34 | 0.9 | 0.88 | 1.63 | -1.06 | -0.93 | -1.4 | -1.1 | -2.07 | -2.3 | -0.62 | -0.74 | -0.54 | |
| -0.82 | 1.29 | 1.09 | 0.06 | -0.59 | -2.14 | 0.78 | -0.38 | 0.4 | -0.97 | -0.02 | -0.16 | -1.98 | -1.08 | |
HUANGJINYA33187 (HVA22A) | -0.31 | 0.86 | 0.73 | 0.67 | 0.79 | -1.15 | -0.24 | -0.66 | -0.28 | -0.66 | 0.17 | -0.31 | -0.78 | -0.99 |
HUANGJINYA33347 (MGL) | -1.61 | 2.46 | 1.88 | -1.07 | -0.17 | -1.3 | -2.64 | -2.82 | -3.41 | 0.59 | -3.92 | -0.44 | - | - |
| -0.84 | 2.97 | 1.97 | -1.84 | -5.47 | -1.83 | -4.86 | -2.37 | -2.64 | -3.97 | - | -5.23 | -2.17 | -1.38 | |
HUANGJINYA35476 (AVA-P2) | -0.15 | 1.0 | 0.44 | -0.42 | -0.47 | -0.1 | 0.14 | 0.2 | 0.14 | 0.06 | -0.79 | -0.22 | -0.3 | -0.52 |
| -3.1 | 2.04 | 1.62 | -1.8 | -1.06 | -4.72 | 0.73 | -1.48 | 0.9 | -0.82 | -1.7 | -1.15 | -0.88 | -2.88 | |
| -0.95 | 0.47 | -0.83 | 1.39 | 1.49 | -2.52 | -0.97 | -1.43 | -1.31 | -0.39 | 0.51 | -0.96 | 0.18 | -0.31 | |
| -1.62 | 2.09 | 1.72 | 0.47 | 0.75 | -3.27 | -2.69 | -3.08 | -2.86 | 0.82 | -2.75 | -1.99 | -2.1 | -2.67 | |
| -0.04 | 1.73 | 0.66 | -0.17 | -2.37 | -0.34 | -0.59 | -0.56 | -0.03 | -1.0 | -0.41 | 0.93 | -1.4 | -1.35 | |
HUANGJINYA41438 (ARA6) | -0.27 | 0.97 | 0.61 | -0.32 | -0.32 | -0.29 | 0.24 | 0.26 | 0.25 | -0.24 | -0.84 | -0.44 | -0.46 | -0.28 |
| -3.08 | 2.36 | 1.68 | -0.11 | 0.35 | -2.26 | -2.73 | -2.34 | -2.4 | 0.86 | -2.93 | -1.73 | -2.44 | -2.64 | |
| -0.98 | 1.34 | 1.0 | 0.21 | 1.71 | -0.59 | -1.27 | -0.9 | -1.7 | -0.33 | -1.3 | -2.03 | -0.71 | -0.84 | |
| -2.62 | 2.36 | 1.61 | 0.24 | 0.6 | -1.27 | -2.24 | -2.15 | -3.52 | 0.37 | -2.59 | -2.87 | -1.88 | -2.75 | |
HUANGJINYA43711 (RABH1e) | -0.43 | 0.85 | 0.51 | -0.16 | 0.66 | 0.02 | 0.02 | 0.28 | 0.02 | -0.35 | -0.48 | -1.31 | -0.54 | -0.47 |
| -1.31 | 2.09 | 1.79 | -0.89 | -1.04 | -4.05 | -0.49 | -1.26 | -0.96 | -1.73 | 0.19 | -0.31 | -0.96 | -1.35 | |
| -0.25 | 1.06 | 0.57 | 0.14 | -0.17 | -0.25 | -0.12 | -0.17 | -0.12 | -0.51 | -0.45 | -0.13 | -0.27 | -0.23 | |
| -2.54 | 0.18 | 0.04 | 1.57 | 1.9 | -2.55 | -0.3 | -0.59 | -2.89 | -0.47 | -1.05 | -2.8 | 0.39 | -0.96 | |
| -0.2 | 0.98 | 1.04 | -0.04 | 0.91 | -0.65 | -0.98 | -0.87 | -1.11 | 0.19 | 0.32 | -1.45 | -0.65 | -0.52 | |
| -1.04 | 0.63 | -1.26 | 0.9 | 1.72 | -1.26 | -3.11 | -2.12 | -0.53 | -0.99 | -1.57 | 0.46 | 0.29 | 0.57 | |
HUANGJINYA45768 (VPS28-2) | -0.42 | 0.88 | 0.56 | -0.02 | 0.79 | -0.99 | 0.3 | 0.14 | -0.05 | 0.21 | -0.82 | -1.2 | -0.68 | -0.62 |
| -1.18 | 1.47 | 0.43 | -0.08 | -0.11 | 0.21 | -0.59 | 0.01 | -0.67 | -0.51 | -0.47 | -0.45 | -0.12 | 0.04 | |
| -0.41 | 1.24 | 0.99 | -0.65 | -1.23 | -1.46 | 0.45 | 0.02 | -0.05 | -0.21 | -0.5 | 0.42 | -0.44 | -1.06 | |
| -1.44 | 1.13 | 0.79 | -0.65 | 0.52 | -0.7 | 0.55 | 0.97 | 0.11 | 0.76 | -1.35 | -2.42 | -2.78 | -3.1 | |
| -0.97 | 1.56 | 1.5 | 1.05 | 0.64 | -5.64 | -2.55 | -3.58 | -3.25 | 0.27 | 0.0 | 0.1 | -2.2 | -2.19 | |
| -1.0 | 1.6 | 1.31 | 0.57 | 1.13 | 0.62 | -0.3 | -0.55 | -1.24 | -0.79 | -3.08 | -4.81 | -4.47 | -3.49 | |
| 0.15 | 2.05 | -0.03 | 1.24 | 1.96 | -2.89 | -3.38 | -3.79 | -5.13 | -4.04 | -6.09 | -4.05 | -1.12 | -0.76 | |
| -5.04 | 1.03 | -0.77 | 1.85 | 2.25 | - | - | - | - | -4.9 | - | -4.55 | 0.56 | 0.49 | |
HUANGJINYA48781 (RPB5B) | -0.8 | 1.47 | 0.83 | 0.07 | -0.96 | -0.54 | 0.24 | 0.1 | 0.13 | 0.15 | -0.46 | -1.23 | -0.89 | -1.06 |
| -2.11 | 1.62 | 1.03 | 0.47 | 1.15 | -1.83 | 0.83 | 0.51 | -0.11 | -1.94 | -4.04 | -2.97 | -3.46 | -3.55 | |
| -3.77 | 2.52 | 1.34 | -0.42 | 1.98 | - | - | - | - | -0.0 | - | - | - | - | |
| -1.55 | 1.54 | 1.44 | -0.1 | 1.39 | -1.91 | -2.46 | -1.89 | -2.63 | 0.5 | -3.02 | -1.01 | -0.38 | -0.3 | |
| -0.05 | 0.54 | 0.38 | 0.33 | 0.23 | -0.87 | -0.12 | -0.34 | -0.17 | -0.06 | -0.27 | 0.21 | -0.25 | -0.12 | |
| -0.55 | 1.75 | 1.06 | -0.4 | -0.28 | -0.59 | -0.42 | 0.12 | -0.39 | -0.53 | -0.4 | -1.31 | -0.85 | -0.7 | |
HUANGJINYA51814 (UCP5) | -2.76 | 2.54 | 1.63 | -1.47 | 0.28 | -2.71 | -4.09 | -3.25 | -3.67 | 1.23 | -1.98 | -1.81 | -4.32 | -4.32 |
| -1.53 | 1.29 | 1.49 | 1.44 | 1.14 | -5.5 | -1.65 | -3.51 | -1.59 | -0.52 | -0.08 | -1.95 | -1.32 | -1.21 | |
HUANGJINYA52729 (NRPB4) | -1.32 | 1.46 | 0.39 | -0.54 | -0.44 | -0.21 | 0.01 | 0.06 | 0.15 | -0.63 | -0.45 | -0.02 | -0.38 | -0.06 |
| -0.33 | 1.4 | 0.97 | -0.74 | -0.66 | -0.35 | 0.44 | 0.13 | 0.25 | -0.37 | -0.97 | -0.37 | -1.08 | -1.25 | |
| -0.41 | 0.51 | 0.33 | 0.11 | 0.79 | 0.08 | 0.15 | 0.25 | -0.09 | 0.0 | -0.86 | -1.0 | -0.59 | -0.43 | |
| -1.56 | 1.89 | 0.7 | -0.17 | 1.47 | -2.36 | -2.46 | -1.71 | -4.09 | 0.36 | -1.06 | -1.08 | -0.44 | -0.06 | |
| -0.48 | 1.7 | 1.27 | -0.48 | -0.76 | -0.45 | -0.46 | -0.51 | -0.48 | -0.58 | -0.43 | -0.24 | -0.77 | -0.73 | |
HUANGJINYA55408 (ATM4) | -1.34 | 0.98 | 0.61 | -0.16 | 1.29 | -2.59 | 0.44 | 0.55 | 0.39 | 0.44 | -1.35 | -3.7 | -1.62 | -1.7 |
HUANGJINYA55409 (ATM4) | -1.41 | 0.4 | 0.76 | -0.32 | 1.59 | -2.54 | -0.17 | 0.53 | 0.15 | 0.57 | -1.73 | -2.82 | -0.53 | -0.85 |
HUANGJINYA56277 (ERF4) | -1.97 | 1.9 | 1.48 | 0.53 | 1.05 | -2.2 | -1.7 | -0.09 | -1.66 | 0.33 | -3.02 | -2.14 | -2.72 | -2.5 |
HUANGJINYA56317 (ERF4) | -3.17 | 2.78 | 2.18 | -2.21 | -1.79 | -1.79 | -2.77 | -2.59 | -3.26 | -0.25 | -3.23 | -2.67 | -3.92 | -3.17 |
| -0.45 | 1.46 | 0.78 | -0.25 | -0.99 | -1.07 | 0.09 | -0.42 | 0.02 | -0.92 | -0.88 | 0.86 | -0.7 | -0.61 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.