Heatmap: Cluster_391 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	second leaf,natural sun/80% shade	third leaf,2-year-old,no treatment	third leaf,2-year-old,shade treatment	fourth leaf,10-year-old,no treatment	fourth leaf,10-year-old,shading treatment	two leaves and a bud,blue light 15d	two leaves and a bud,blue/red (1:1) light 15d	two leaves and a bud,red light 15d	two leaves and a bud,white light 15d	second leaf,missing,no treatment	leaf,missing,no treatment	two leaves and a bud,missing,no treatment	tender leaf,red/white (2:3) light 10d	tender leaf,white light 10d
HUANGJINYA00201	0.13	-1.3	0.04	-0.48	-1.81	0.31	-0.0	0.19	-0.25	0.45	-0.43	-5.2	1.0	1.07
HUANGJINYA01082 (BMY5)	0.17	-0.64	-0.26	-0.68	-0.8	-1.1	-1.95	-2.72	-1.72	1.26	-0.62	-2.51	1.52	1.56
HUANGJINYA01083 (RAM1)	-0.6	-	-1.95	-1.32	0.28	-	-	-	-	-0.7	-1.4	-1.88	2.56	2.11
HUANGJINYA01118	-0.78	-0.46	0.39	-2.02	-1.68	-2.84	-1.38	-0.86	-1.52	0.93	-0.81	-1.04	1.97	1.32
HUANGJINYA01525	-0.48	-0.01	-0.5	0.07	-1.11	0.54	-0.81	-0.33	-0.12	-0.1	0.39	-3.04	1.0	0.97
HUANGJINYA01779 (AIR3)	-0.76	-2.09	-1.37	-0.87	-1.0	-3.96	-	-2.65	-1.49	1.65	-1.23	-0.75	1.71	1.9
HUANGJINYA05196 (AMI1)	-0.22	-0.54	-0.4	0.15	-0.48	0.01	-0.24	-0.23	-0.02	0.21	0.12	-0.78	0.74	0.74
HUANGJINYA05336	-0.58	-1.0	0.11	-0.52	-0.51	-0.46	-1.0	-0.78	-1.13	1.11	1.03	-3.18	0.91	0.91
HUANGJINYA05496	-0.45	-1.38	-0.87	-0.32	-0.35	0.0	-0.04	0.33	-0.12	-0.04	0.01	-1.47	1.15	1.04
HUANGJINYA05592	-0.35	-3.19	-1.01	-0.4	-1.35	-	-2.32	-	-1.35	-0.02	0.88	0.2	2.07	1.43
HUANGJINYA06221 (MGD2)	-0.17	-1.01	-0.42	-0.43	-0.58	0.29	0.09	0.19	-0.11	0.43	0.18	-0.74	0.55	0.62
HUANGJINYA06258	0.05	-0.29	-0.78	-0.5	-1.06	0.29	-1.0	-1.12	-0.72	0.87	-0.55	-1.56	1.29	1.2
HUANGJINYA06449	-0.46	0.18	-1.19	-1.33	-	-0.08	-	-	-	1.3	-1.03	-0.66	1.71	1.81
HUANGJINYA06553	-0.04	-2.12	-0.34	-1.98	-2.37	0.05	0.12	0.44	0.14	0.27	-2.49	-3.94	1.45	1.49
HUANGJINYA07148	-1.0	-2.24	-0.09	-1.41	0.19	-	-	-	-	0.43	-0.02	-2.51	2.06	2.05
HUANGJINYA07304	-0.25	-0.49	0.07	0.13	-0.23	-0.22	-0.17	-0.47	-0.23	0.3	0.27	-0.81	0.52	0.74
HUANGJINYA08321	0.14	-0.63	0.35	-2.19	-2.56	-1.76	-4.62	-6.67	-4.8	0.46	-4.22	-5.34	2.23	2.03
HUANGJINYA09771 (HCC1)	-0.15	-1.71	-1.36	0.38	-0.53	-0.41	-0.63	-0.6	-0.96	0.54	0.86	-1.2	0.91	1.17
HUANGJINYA10599 (PHS2)	-0.53	-0.98	-0.47	-0.55	-0.91	-0.05	0.21	-0.05	0.17	0.79	-0.23	-0.84	0.84	0.78
HUANGJINYA10977	-0.27	-1.4	-0.93	-0.16	-1.54	-0.3	0.28	0.29	-0.03	0.74	-0.36	-0.55	1.01	0.73
HUANGJINYA13029	-0.1	-0.83	-0.23	-1.42	-0.62	-0.31	-0.4	-0.57	-0.26	0.77	-0.6	-0.21	1.13	1.1
HUANGJINYA13044	-0.21	-0.11	-0.26	-0.58	-2.12	0.44	0.13	-0.43	0.16	0.64	0.17	-1.84	0.63	0.73
HUANGJINYA13202 (PRR7)	-0.65	-0.76	-0.3	-0.48	-0.16	0.01	0.01	-0.02	-0.03	0.39	0.24	-1.27	0.76	0.82
HUANGJINYA15045	-0.15	-0.62	-0.14	-1.39	-1.45	0.54	0.34	0.28	0.46	0.33	-0.91	-1.38	0.68	0.77
HUANGJINYA15213	0.06	-1.94	-1.69	-0.25	-1.02	-2.66	-0.58	-4.61	-0.14	-1.03	1.14	-3.17	1.83	1.55
HUANGJINYA15215	0.56	-0.82	-0.09	0.14	-0.52	-2.97	-0.97	-3.68	0.03	-1.04	0.08	-3.23	1.59	1.5
HUANGJINYA15296 (ATL4H)	-0.14	0.04	-0.2	-0.27	-0.78	-0.22	-0.6	-0.95	-0.62	0.81	0.03	-1.21	0.95	0.97
HUANGJINYA15584 (MRP3)	-0.19	-0.76	-0.37	-0.4	0.38	-0.15	-0.59	-0.64	-1.08	0.52	0.79	-2.58	0.77	0.98
HUANGJINYA15883 (AKINBETA1)	-0.77	-1.02	-0.79	-2.04	-2.06	-0.6	-0.72	-1.63	-0.28	1.15	-0.24	-1.47	1.66	1.52
HUANGJINYA15931	0.03	-0.23	0.44	-1.07	-1.76	-0.05	-0.71	-1.63	-1.09	0.13	-1.69	-0.5	1.52	1.4
HUANGJINYA16176 (MPL1)	-0.12	-2.04	-1.26	-	-27.88	0.76	-3.07	-0.62	-0.95	-0.32	-1.36	-1.84	2.32	1.56
HUANGJINYA16194	0.04	-2.07	-1.81	-0.15	-0.35	-0.72	-6.47	-6.52	-6.56	0.74	-3.95	-2.84	2.29	1.74
HUANGJINYA16196 (MPL1)	0.17	-1.27	-0.76	0.29	-0.4	-0.55	-1.03	-1.45	-0.96	0.07	-3.45	-2.91	1.96	1.42
HUANGJINYA16978	-0.07	-0.01	0.03	-0.48	-0.64	-0.5	-0.05	-0.12	0.04	0.12	-0.13	-0.64	0.71	0.83
HUANGJINYA16979	0.06	0.08	0.07	-0.25	-0.57	-0.57	0.13	-0.1	0.09	0.39	-0.27	-0.77	0.55	0.46
HUANGJINYA17249	-1.13	-1.17	-0.47	-0.83	-0.58	0.46	-0.66	-0.33	-0.01	1.09	-4.13	-5.94	1.43	1.29
HUANGJINYA18437 (NADP-ME4)	-0.69	-0.61	-0.62	-0.03	-0.25	0.38	-1.82	-0.76	-0.85	0.76	-1.04	-0.52	1.32	1.1
HUANGJINYA19400	-0.4	-0.31	-0.68	-2.03	-0.49	0.5	-0.84	-0.8	-1.09	-0.32	-0.31	-4.07	1.41	1.81
HUANGJINYA20468	-0.14	-0.49	-0.02	-1.24	-2.07	-0.44	0.37	0.27	0.28	0.35	-0.12	-1.07	0.89	0.81
HUANGJINYA20662 (AGD11)	-0.54	-0.63	0.65	-0.49	0.76	-1.14	-0.91	-1.25	-0.99	0.63	-0.93	-2.59	1.35	1.01
HUANGJINYA20815 (CRK42)	-0.67	-1.34	0.11	-0.13	0.54	-1.2	0.08	-0.05	0.09	0.6	-2.19	-3.29	1.05	1.07
HUANGJINYA21351 (DPE2)	-0.78	-0.41	-0.18	-1.11	-1.18	-0.12	-0.83	-1.29	-0.62	0.9	0.15	-1.92	1.39	1.31
HUANGJINYA21711	-0.45	-1.73	-2.62	-2.55	1.16	-2.54	-0.25	-1.55	-1.61	0.38	-2.75	-4.17	2.11	1.53
HUANGJINYA21793 (TT12)	0.52	-1.05	-0.6	-3.04	-2.41	-0.34	-1.01	-1.72	-0.85	0.06	-0.22	-1.46	1.62	1.86
HUANGJINYA22880 (UGT84B1)	-0.14	-0.22	-0.44	-0.87	-2.92	0.81	-0.2	-0.45	0.13	0.31	-0.46	-2.86	1.12	1.06
HUANGJINYA23416	-0.35	-1.24	-0.81	-0.18	-0.04	0.2	-0.84	0.05	-0.68	0.46	-0.63	-0.81	1.07	1.21
HUANGJINYA23475	-0.26	-1.46	-0.64	-1.37	-0.85	0.46	0.0	-0.43	0.16	0.84	-1.21	-2.32	1.15	1.23
HUANGJINYA23476	-0.31	-1.87	-0.95	-1.77	-1.12	0.59	-0.46	-0.68	-0.44	0.79	-1.24	-1.39	1.46	1.47
HUANGJINYA23522	-0.38	-0.79	-0.47	-0.08	-0.22	0.01	-0.27	-0.17	-0.16	0.54	0.44	-0.91	0.73	0.59
HUANGJINYA23771	0.32	-3.35	0.19	-1.74	-2.0	-1.81	-1.91	-1.74	-2.19	0.37	-1.2	-0.7	2.05	1.76
HUANGJINYA23773	-0.35	-0.4	0.1	0.15	-0.6	-1.03	-0.7	-0.87	-0.58	-0.15	-0.25	-1.04	1.22	1.45
HUANGJINYA24026	-0.61	-1.17	0.46	0.18	0.86	-2.46	-	-3.25	-	0.48	-0.14	0.06	1.34	1.27
HUANGJINYA24538 (AMK2)	-0.54	-0.13	0.07	-0.23	0.02	-0.04	-1.29	-1.04	-1.23	0.76	-0.83	-0.87	1.12	1.15
HUANGJINYA25227	-0.39	-0.28	-0.12	-0.18	-0.29	-0.31	-0.17	-0.11	-0.12	0.22	0.26	-0.51	0.63	0.71
HUANGJINYA25582 (XTH27)	-0.4	-1.42	0.14	-1.28	-1.55	-0.32	0.38	0.02	0.24	0.64	-1.97	-2.85	1.33	1.17
HUANGJINYA27152 (TBL19)	-0.8	-0.81	0.09	-0.26	-0.58	-0.27	0.17	-0.24	0.24	0.69	-0.39	-4.65	0.99	0.94
HUANGJINYA27312 (PRR1)	0.25	-0.83	-0.13	-1.78	-2.76	0.07	-0.55	-0.79	0.14	0.33	-1.74	-2.94	1.47	1.6
HUANGJINYA29004	-0.19	-1.81	-1.06	-1.76	-2.11	-0.04	-0.18	-1.32	0.26	1.23	-0.62	-2.16	1.39	1.35
HUANGJINYA29244	-0.2	-2.56	-2.04	-0.45	-2.06	-1.56	-3.74	-3.65	-2.4	0.65	0.04	-2.09	2.17	1.89
HUANGJINYA29471 (UGT85A5)	-1.26	-4.89	-0.78	0.46	-0.23	-3.62	-3.84	-3.38	-2.24	1.39	-2.72	-3.03	1.88	1.89
HUANGJINYA30452 (GLZ1)	-0.5	-1.31	0.19	-0.37	0.69	-2.36	-0.34	-1.8	-0.38	0.81	-1.1	-3.58	1.26	1.39
HUANGJINYA31366 (NAKR2)	-0.18	-1.22	-0.48	-0.4	-0.66	0.24	-0.08	-0.14	0.13	0.88	-0.15	-1.25	0.62	0.81
HUANGJINYA31433 (ISA3)	-0.41	-0.65	-0.21	-0.7	-0.44	0.03	-1.89	-1.87	-2.07	1.18	0.74	-1.53	1.16	1.05
HUANGJINYA31795	-0.96	-0.53	0.19	0.71	0.34	-	-	-	-2.96	-0.77	-0.24	-1.06	1.73	1.77
HUANGJINYA31838 (AAP7)	-0.22	-0.45	-0.46	-0.44	-1.04	0.22	-0.28	-0.53	-0.3	0.4	0.08	-0.51	0.88	1.03
HUANGJINYA32160	0.17	-1.07	-0.3	-1.52	-1.69	-0.15	-0.14	-0.73	-0.18	0.59	-1.47	-2.8	1.56	1.43
HUANGJINYA32340 (APS2)	-0.69	-0.68	-0.92	0.66	0.32	-2.04	-0.25	-1.27	0.02	-0.27	-0.38	-0.32	1.25	1.08
HUANGJINYA32735 (SYTF)	-0.47	-1.12	-0.6	0.01	0.26	0.0	-0.27	-0.08	-0.23	0.59	-0.7	-1.03	0.95	0.83
HUANGJINYA34125	-0.1	-0.58	-0.19	-0.61	-0.93	0.1	0.14	0.29	-0.07	0.15	-0.28	-1.01	0.79	0.87
HUANGJINYA34289	-0.06	-1.34	-0.48	0.17	-0.26	-0.27	-0.22	-0.47	-0.43	0.59	0.17	-1.09	0.84	0.95
HUANGJINYA34924	-0.39	-0.56	0.36	-0.65	-1.84	-3.28	-0.11	-1.22	-0.9	-0.57	-1.07	-0.18	1.92	1.34
HUANGJINYA35586	-0.05	-1.72	-0.74	-1.47	-1.53	0.72	0.17	-0.17	0.39	1.0	-0.5	-3.46	0.73	0.99
HUANGJINYA35767 (TOC1)	-0.37	-1.49	-1.13	-1.76	-2.98	0.62	0.49	0.15	0.37	0.63	-0.21	-1.71	1.01	0.93
HUANGJINYA36119	-0.63	-	-0.08	-	-1.38	-	-	-	-0.81	-0.74	-	-	2.26	2.6
HUANGJINYA38557	-1.01	-0.84	0.18	0.16	-0.2	0.23	-2.42	-2.73	-2.52	0.92	-1.06	-3.6	1.54	1.48
HUANGJINYA39288	-0.17	-0.42	-0.27	-0.25	-0.3	-0.56	0.13	-0.2	0.17	0.27	-0.02	-0.71	0.72	0.74
HUANGJINYA40356	-0.36	-1.71	-0.56	-1.12	0.46	-4.5	0.38	-0.3	0.35	0.48	-0.04	-3.16	1.24	1.08
HUANGJINYA41946	-0.27	-2.14	-1.02	0.99	0.62	-5.8	-5.59	-5.79	-	-4.85	0.49	-2.67	1.79	1.93
HUANGJINYA41986 (MEX1)	-0.1	-1.0	-0.9	-1.27	-0.77	-0.37	-0.26	-0.38	-0.14	0.9	-0.22	-0.93	1.14	1.2
HUANGJINYA42589 (UGT85A2)	-0.58	-0.87	-0.29	-1.1	-1.6	-0.03	-1.66	-0.84	-1.74	1.21	-1.75	-0.83	1.49	1.61
HUANGJINYA43139 (CLPX)	-0.22	-1.21	-0.78	-0.19	0.04	-0.07	-0.41	-0.35	-0.76	0.52	0.19	-1.0	0.89	1.14
HUANGJINYA43455	-1.44	-0.91	-1.41	0.62	0.93	-	-	-2.27	-2.53	0.05	-0.27	-0.94	1.79	1.61
HUANGJINYA44089	-0.81	-0.66	0.42	-1.47	0.17	-	-0.08	-1.41	-	0.29	0.14	-3.13	2.05	1.04
HUANGJINYA44173 (GGT1)	-0.91	-0.66	-0.4	-0.35	0.26	-0.11	-0.43	-0.3	-0.23	0.63	-0.59	-1.4	0.99	1.12
HUANGJINYA44298	-0.47	-2.3	-1.23	-0.76	-0.36	-0.76	-2.58	-3.97	-2.34	1.45	-1.4	-3.31	1.85	1.79
HUANGJINYA44307 (ARF16)	0.03	-1.07	-0.62	-0.5	-1.86	0.3	-0.25	-0.67	-0.16	0.83	0.2	-1.8	1.1	0.94
HUANGJINYA45094 (EMB1025)	-0.15	-0.98	-0.7	0.28	-0.52	-0.56	-0.61	-0.54	-0.41	0.3	0.43	-1.17	0.9	1.26
HUANGJINYA47437 (TMT2)	-0.21	-0.35	-0.72	-1.24	-0.49	0.3	-1.11	-0.74	-0.73	0.92	0.09	-1.68	1.22	1.09
HUANGJINYA48100	-0.08	-0.06	-0.49	-0.2	0.42	-4.78	-5.25	-	-5.29	0.27	-0.85	-0.61	1.6	1.87
HUANGJINYA49129	0.32	-0.84	0.26	-0.81	-1.59	-4.06	-0.52	-3.0	-1.42	0.12	0.94	-3.16	1.35	1.66
HUANGJINYA49246 (TOC1)	-0.75	-0.38	-0.55	-1.04	-2.21	0.06	0.36	-0.45	-0.18	0.5	-0.0	-2.16	1.33	1.12
HUANGJINYA49443	-0.54	-1.86	-0.89	-0.68	0.17	0.14	-1.06	-0.16	-1.35	0.96	0.16	-1.39	1.07	1.23
HUANGJINYA50159 (SKL1)	-0.12	-0.27	-0.02	-0.06	-0.89	-0.67	-1.45	-1.6	-1.8	0.68	0.24	-4.18	1.39	1.43
HUANGJINYA50404	-0.26	-0.12	0.01	-0.07	-0.44	0.1	-0.21	-0.22	-0.35	-0.09	-0.42	-0.68	0.84	0.9
HUANGJINYA51053 (RALFL24)	-0.04	0.3	-0.3	-1.21	-3.38	-2.23	-0.85	-0.5	-0.63	0.49	-0.3	-0.26	1.49	1.31
HUANGJINYA51222 (SEU)	-0.64	-1.65	-0.99	-0.21	-0.31	0.4	-0.32	0.04	-0.55	0.35	-0.16	-1.34	1.07	1.24
HUANGJINYA51252 (IGPD)	-0.06	-0.25	0.1	-0.41	-0.38	0.17	-0.13	0.07	-0.19	0.02	-0.07	-0.55	0.46	0.69
HUANGJINYA52238	-0.47	-	0.21	-0.03	1.13	-	-	-	-	-1.37	-	0.2	2.12	1.62
HUANGJINYA52429	-1.82	-0.99	-0.59	0.62	-0.52	-1.98	-	-0.92	-	0.58	0.9	-	1.6	1.65
HUANGJINYA52492 (ZF14)	-0.28	-2.34	-0.79	-2.33	-2.49	-0.27	-3.3	-2.32	-2.58	1.12	1.41	-3.7	1.43	1.64
HUANGJINYA53582 (ATB2)	-0.44	-0.91	0.01	-0.92	-0.18	-1.37	0.3	0.09	-0.07	0.5	-0.27	-2.42	1.1	1.07
HUANGJINYA53739 (GI)	-0.69	-0.92	-0.18	-0.31	0.38	0.24	-0.9	-1.18	-1.33	0.74	0.25	-1.1	0.9	1.08
HUANGJINYA54302	0.09	-0.43	0.04	-0.59	-0.75	0.24	0.11	0.06	-0.04	0.31	-0.05	-1.15	0.61	0.54
HUANGJINYA54824	-0.35	-0.49	-0.18	-0.96	-1.82	0.69	0.28	-0.02	0.32	0.41	-0.21	-0.76	0.63	0.51
HUANGJINYA55025 (ENT3)	-0.29	-0.48	-0.38	-1.11	-0.55	-0.94	-3.09	-1.51	-2.16	1.12	-3.38	-4.87	1.89	1.73
HUANGJINYA55261	-0.11	-0.57	-1.18	-0.76	-0.74	-1.55	-	-2.48	-2.49	0.52	0.19	-2.4	1.78	1.96
HUANGJINYA55412	-0.13	-0.82	0.13	-2.32	-1.46	0.16	0.02	-0.18	-0.25	0.98	-0.51	-4.77	1.09	1.12
HUANGJINYA55413 (STP12)	-0.12	-0.53	0.43	-2.0	-1.25	-0.35	-0.76	-0.95	-0.99	0.49	-0.63	-4.26	1.67	1.43
HUANGJINYA55414 (STP1)	0.01	-0.61	-0.23	-1.61	-1.4	0.48	0.38	0.13	0.26	0.84	-0.16	-3.37	0.6	0.58
HUANGJINYA55985	-0.56	-1.22	-0.77	0.15	-0.44	0.03	0.06	0.01	0.04	0.74	-0.53	-1.04	0.87	0.76
HUANGJINYA57352 (SIP2)	0.11	-0.93	-0.42	0.29	-0.63	-0.99	-2.47	-3.92	-2.05	1.12	-0.32	-1.01	1.53	1.29
HUANGJINYA58088	-0.27	-	-0.09	-1.09	-1.0	-	-	-	-	0.09	-0.49	-1.1	2.5	1.75

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.