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Heatmap: Cluster_484 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
second leaf,natural sun/80% shade
third leaf,2-year-old,no treatment
third leaf,2-year-old,shade treatment
fourth leaf,10-year-old,no treatment
fourth leaf,10-year-old,shading treatment
two leaves and a bud,blue light 15d
two leaves and a bud,blue/red (1:1) light 15d
two leaves and a bud,red light 15d
two leaves and a bud,white light 15d
second leaf,missing,no treatment
leaf,missing,no treatment
two leaves and a bud,missing,no treatment
tender leaf,red/white (2:3) light 10d
tender leaf,white light 10d
-0.48 0.08 0.24 0.04 -0.78 -0.49 -0.47 -0.26 -0.71 -0.16 1.23 0.43 -0.09 0.04
0.41 -0.14 0.22 0.02 -1.16 -0.68 -0.5 -0.94 -0.3 0.75 0.85 0.0 0.03 -0.04
0.28 0.05 0.39 0.29 0.41 - - -2.12 -2.11 -0.7 1.6 - 1.11 0.7
0.79 0.38 0.2 -0.31 -2.64 -0.57 -0.91 -1.22 -0.88 1.03 0.87 -0.2 -0.06 -0.04
0.39 -0.38 -0.05 0.31 -0.81 -0.94 -0.53 -1.11 -0.49 0.85 0.85 0.43 0.05 -0.35
0.12 0.42 -0.03 0.35 -0.73 -0.0 -0.45 -0.32 -0.35 0.25 0.54 -0.05 -0.12 -0.19
-0.08 0.07 0.05 0.13 -0.14 -0.16 -0.24 -0.08 -0.38 0.1 0.64 -0.1 -0.07 -0.01
-0.17 -0.12 0.21 -0.08 -1.16 -0.35 -0.22 0.21 -0.21 0.48 0.63 0.07 0.11 -0.14
-0.2 0.91 0.17 0.22 -0.8 -0.37 -0.46 -0.54 -0.12 -0.21 1.31 -1.58 -0.34 -0.33
-0.1 -0.11 0.62 0.25 -0.71 -2.78 -1.11 -3.39 -1.72 1.45 0.49 0.07 0.48 0.3
0.19 0.8 0.3 -0.21 -3.01 -1.08 -1.93 -0.75 -1.05 -0.28 2.35 -1.67 -1.2 -1.31
0.12 0.88 0.13 0.22 -1.06 -2.11 -3.02 -1.46 -3.05 -0.34 2.48 -2.13 -0.79 -1.69
-0.11 1.28 0.26 -0.58 -1.04 -0.84 -2.18 -1.46 -1.78 -0.01 1.98 -0.48 -0.6 -0.88
0.19 0.28 0.28 0.15 -0.69 -0.12 -0.53 -0.31 -0.54 0.12 0.75 -0.11 -0.2 0.03
-0.1 0.08 0.6 -1.65 -1.42 -1.82 -2.56 -1.1 -2.42 0.49 1.21 0.08 1.17 0.75
-0.08 -0.07 0.15 -0.17 -0.62 -1.04 -0.76 -1.29 -0.84 0.88 0.97 -0.04 0.4 0.41
0.13 -0.08 0.15 -0.44 -1.05 -1.24 -1.72 -1.35 -1.42 0.56 0.74 0.39 0.82 0.93
0.83 0.69 0.55 -0.16 0.1 -3.51 -1.03 -3.23 -2.6 0.55 1.14 -21.23 0.45 0.39
-0.25 0.16 -0.59 -1.99 -1.63 -1.66 -2.69 -2.71 -1.39 0.66 1.64 0.56 1.04 0.63
-0.12 0.26 0.02 0.3 -0.76 -0.2 -0.36 0.09 -0.32 -0.1 0.54 0.07 0.07 0.07
0.1 0.28 -0.17 0.31 -0.39 -0.32 -0.05 -0.65 -0.1 0.52 0.75 -0.39 -0.43 -0.22
-0.15 -0.14 -0.18 -0.49 -1.69 -1.22 -1.11 -1.99 -1.56 0.73 1.22 -0.0 0.93 0.95
0.08 0.12 0.4 0.16 -1.02 -0.36 -0.42 -0.85 -0.67 0.43 1.01 -0.26 0.05 -0.02
-0.07 -0.01 0.21 0.04 -0.34 -0.69 -0.52 -0.18 -0.5 0.5 0.63 -0.09 0.14 0.23
0.4 0.25 0.2 0.16 -0.04 -0.42 -0.3 -0.01 -0.6 0.37 0.4 -0.17 -0.45 -0.3
0.35 0.3 0.01 -0.07 -0.93 -0.03 -0.56 -0.63 -0.64 0.63 0.82 -0.1 -0.12 -0.16
0.39 0.4 0.3 0.09 -0.97 -1.51 -1.49 -2.19 -1.58 0.87 1.0 0.21 0.2 0.24
-1.29 0.17 0.03 0.27 -2.04 -2.26 -1.44 -2.2 -2.77 1.1 2.01 -0.03 0.18 -0.39
0.35 -0.08 0.24 -0.44 -1.32 -0.69 -0.79 -0.85 -0.81 0.69 1.04 0.25 0.18 0.19
-0.33 0.29 -0.36 -0.08 -1.08 -2.52 -1.24 -1.65 -1.08 0.72 1.37 -0.9 0.95 0.77
0.3 0.3 0.29 -0.0 -2.77 -1.32 -0.99 -1.08 -2.04 -0.3 1.86 0.9 -0.65 -0.76
0.02 0.05 0.35 -0.82 -1.76 -3.24 -3.15 -4.18 -1.71 1.04 1.35 0.22 1.17 0.27
-0.07 1.07 0.6 -0.31 -0.79 -1.54 -0.8 -0.89 -1.48 -0.21 1.77 - -0.12 0.04
0.67 0.6 0.14 0.4 -0.33 -3.06 -2.4 -3.99 -3.0 0.44 1.29 -1.87 0.93 0.27
0.15 0.26 -0.08 0.0 -0.27 -0.61 -1.09 -1.29 -1.26 0.69 1.49 -0.87 -0.08 0.07
0.45 0.3 0.03 0.05 -1.17 -0.08 -0.58 -0.33 -0.41 0.24 1.3 -1.59 -0.2 -0.18
0.19 -0.06 0.12 -0.5 -1.01 -0.2 -0.35 -0.7 -0.41 0.5 1.08 -0.01 0.04 0.04
0.12 0.25 0.1 -0.15 -0.97 -0.26 -0.13 0.33 -0.26 -0.35 0.28 0.32 -0.06 0.26
0.21 0.06 0.13 0.22 -0.96 -0.55 -1.05 -1.13 -1.05 -0.87 1.78 0.9 -0.83 -0.99
-0.32 0.02 0.09 0.1 -0.09 -0.3 -0.72 -0.64 -0.9 0.56 1.12 -0.52 0.06 0.17
0.87 0.72 -1.43 0.65 -2.03 - - - - -0.06 0.16 -0.49 1.8 1.06
-0.01 -0.01 0.02 0.08 -0.05 -0.63 -0.03 -0.01 -0.07 0.13 0.16 -0.04 0.13 0.18
0.86 1.12 0.21 -0.13 -1.73 -1.39 -1.74 -1.69 -1.5 1.3 0.65 0.04 -0.51 -0.92
0.65 -0.13 0.8 0.56 0.25 -2.98 -4.33 -2.74 -3.25 0.86 1.4 -0.35 -0.64 -0.32
0.37 0.48 0.01 0.03 -1.97 -0.05 -0.56 -0.29 -0.59 0.59 0.93 0.04 -0.48 -0.44
0.09 0.26 0.45 -0.02 -1.18 -0.37 -0.18 -0.18 -0.77 0.32 0.92 -0.21 -0.28 -0.02
0.1 0.57 -0.14 -0.53 0.17 -2.31 -2.23 - -2.25 0.53 1.79 -1.9 0.03 0.93
-0.15 -0.02 0.13 0.15 -0.49 -0.44 -0.15 -0.11 -0.32 0.21 0.64 0.1 -0.08 0.13
0.13 0.53 0.32 0.12 -1.48 -0.67 -1.15 -0.63 -0.83 -0.23 1.66 0.14 -0.55 -0.57
0.07 0.18 0.07 -0.08 -0.09 -0.18 -0.88 -0.13 -1.23 0.22 1.23 -0.29 -0.05 -0.27
0.55 0.58 0.35 0.38 -2.81 -2.3 -1.97 -2.23 - -0.04 2.2 0.13 -0.61 -1.55
-0.36 0.82 0.47 -0.69 -1.68 -0.84 -0.76 -1.51 -3.09 0.19 2.07 -1.0 -0.49 -0.05
0.33 0.23 0.36 0.1 0.1 -1.0 -0.37 -0.08 -0.49 0.61 0.54 -0.57 -0.37 -0.35
0.43 -0.13 -0.09 -0.35 -1.88 0.3 -0.71 -0.62 -0.67 0.56 1.23 -0.27 -0.09 0.04
0.38 0.15 0.15 -0.55 -2.51 -0.49 -0.22 -0.35 -0.11 0.46 1.16 -0.1 -0.15 -0.13

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.