Heatmap: Cluster_500 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	second leaf,natural sun/80% shade	third leaf,2-year-old,no treatment	third leaf,2-year-old,shade treatment	fourth leaf,10-year-old,no treatment	fourth leaf,10-year-old,shading treatment	two leaves and a bud,blue light 15d	two leaves and a bud,blue/red (1:1) light 15d	two leaves and a bud,red light 15d	two leaves and a bud,white light 15d	second leaf,missing,no treatment	leaf,missing,no treatment	two leaves and a bud,missing,no treatment	tender leaf,red/white (2:3) light 10d	tender leaf,white light 10d
HUANGJINYA00247 (CSLE1)	0.74	0.36	0.01	0.21	-0.21	-1.15	-1.47	-0.76	-3.09	-0.45	0.45	1.19	-0.16	0.3
HUANGJINYA01045	0.5	-1.44	-	-0.31	-0.77	-3.84	-0.67	-1.32	-	0.98	0.44	0.02	0.83	1.85
HUANGJINYA01271	0.05	-1.01	-0.36	-0.74	-2.23	-0.09	-0.51	-0.86	-0.2	0.35	1.07	-0.28	0.83	0.88
HUANGJINYA01562 (GAPCP-1)	0.51	-1.34	-0.92	-0.37	-1.19	-0.94	-0.46	-0.41	-0.35	-0.57	1.09	0.16	0.74	1.04
HUANGJINYA03097	0.91	-0.41	-0.42	0.46	0.51	-5.42	-2.44	-2.06	-3.17	-0.03	0.42	0.36	0.94	0.8
HUANGJINYA03113	0.43	-0.55	-0.63	0.02	-0.67	-0.73	-0.57	-0.28	-0.86	0.67	0.81	-2.0	0.89	0.66
HUANGJINYA03130	0.23	-0.7	-0.08	0.27	-0.19	0.25	-0.3	-0.15	-0.29	0.28	0.27	-0.13	0.05	0.12
HUANGJINYA04403	-0.74	0.13	-0.45	-1.37	-1.33	-0.81	-0.73	-1.75	-0.17	0.23	-	-	1.7	2.0
HUANGJINYA05243	0.48	0.2	-0.06	-0.08	-0.82	-0.01	-1.89	-1.64	-1.47	0.44	0.63	0.4	0.41	0.58
HUANGJINYA06396	0.3	-0.45	-0.29	0.08	-0.18	0.41	-0.25	-0.28	-0.29	0.19	0.43	0.12	0.03	-0.18
HUANGJINYA06712 (TIM)	0.32	-0.03	-0.02	-0.31	-0.87	0.38	-0.54	-0.73	-0.29	0.25	0.25	0.3	0.29	0.26
HUANGJINYA07285	0.3	-1.3	-1.49	0.28	-1.25	-0.25	0.11	-2.41	0.01	-0.95	-0.46	0.77	1.26	0.94
HUANGJINYA07314	0.34	-0.41	-0.12	-0.4	-0.25	-3.73	-0.75	-0.02	-1.04	-0.87	0.47	0.07	1.06	1.17
HUANGJINYA07675 (GT)	0.93	-0.29	-0.25	0.05	-1.15	-1.71	-1.52	-2.84	-1.11	1.13	0.35	0.28	0.67	0.5
HUANGJINYA08141	0.25	-1.36	-0.89	-0.39	-1.85	-2.68	-2.01	-2.62	-1.03	0.26	0.86	1.06	1.4	1.04
HUANGJINYA08276 (ACLA-2)	0.13	-1.05	-0.85	-0.12	-0.11	-1.21	-0.08	-0.0	-0.08	-0.3	1.03	0.23	0.29	0.53
HUANGJINYA08958	0.42	-0.62	-1.01	0.29	-3.3	-0.72	-	-0.77	-3.48	0.53	1.35	-	1.37	1.21
HUANGJINYA09275	-0.14	-0.09	-0.29	0.33	-0.2	-1.11	-0.62	-1.07	-0.71	0.51	0.48	-	1.17	0.95
HUANGJINYA09403	-0.8	0.52	-1.61	-0.45	-0.39	-1.1	-0.49	-1.6	-1.09	1.24	-0.77	-1.97	1.45	1.17
HUANGJINYA09446	0.44	-0.06	-0.24	0.17	-0.5	0.29	-0.73	-0.68	-0.69	0.61	0.2	0.16	0.05	0.14
HUANGJINYA09910	1.94	-	-1.91	-	0.37	-	-	-	-	-0.71	-1.17	-	1.99	1.84
HUANGJINYA11308	0.3	-0.12	-0.31	0.04	-0.22	0.02	-0.26	-0.46	-0.15	0.11	-0.04	0.1	0.41	0.29
HUANGJINYA12999	0.92	-0.99	0.27	-0.79	-0.07	-1.35	-0.67	-1.97	-1.11	-0.45	0.81	0.03	0.9	0.81
HUANGJINYA13131 (E37)	0.36	-0.22	-0.25	-0.39	-0.85	0.07	-0.35	-0.39	-0.31	0.62	0.33	-0.1	0.42	0.31
HUANGJINYA13167	0.82	-1.86	-1.87	-0.27	0.24	0.7	-1.06	-0.2	-1.49	-0.59	0.08	0.11	1.14	0.42
HUANGJINYA13430	0.12	0.24	0.5	-0.19	-0.65	-0.03	-0.33	-0.96	-0.88	-0.34	0.59	-2.1	0.73	0.83
HUANGJINYA13466	-0.19	-0.72	-0.04	-4.44	-0.96	-0.35	-1.15	-0.12	-2.87	0.98	-0.26	0.81	1.02	1.07
HUANGJINYA13469	-0.27	-0.85	0.0	-1.28	-0.64	-1.32	0.36	0.65	0.04	1.03	0.0	0.28	0.09	-0.06
HUANGJINYA13470	-0.44	-1.63	0.13	-2.04	-0.87	-0.35	-1.07	0.08	-1.37	0.71	0.12	0.74	0.93	1.04
HUANGJINYA13471	0.13	-0.77	0.02	-2.1	-0.73	-1.59	-0.29	0.26	-0.45	0.93	0.44	0.23	0.33	0.76
HUANGJINYA13682	0.33	-0.7	-0.46	-0.6	-1.18	-0.93	-0.61	-0.58	-0.63	-0.34	0.88	0.95	0.37	0.95
HUANGJINYA13995	0.52	0.32	0.46	-1.31	-1.79	-0.75	-1.09	-1.01	-2.2	-0.21	0.24	-1.14	1.17	1.44
HUANGJINYA15761 (AAE18)	0.64	-1.3	-1.05	-0.78	-1.46	-1.7	-2.05	-1.96	-1.88	-0.15	1.3	0.74	1.06	1.27
HUANGJINYA16998	0.74	0.28	-0.32	1.03	-0.54	-1.77	-2.49	-2.36	-3.93	0.76	-0.3	-0.25	1.04	0.54
HUANGJINYA17275 (FSD3)	0.43	0.01	-0.18	-0.38	-1.35	0.46	-0.49	-0.28	-0.07	0.04	0.42	0.32	-0.07	0.21
HUANGJINYA17657	0.69	-0.46	-0.93	-0.27	-0.48	-1.47	-1.6	-1.59	-1.74	0.08	0.87	0.66	0.69	1.13
HUANGJINYA18204	0.3	-1.44	-1.18	-0.2	-0.43	-0.5	-0.94	-0.76	-1.18	0.15	0.44	0.38	1.1	1.13
HUANGJINYA18369	0.23	0.46	-1.01	-0.32	-1.53	-0.53	-1.25	-2.54	-0.77	0.55	1.13	-1.73	1.08	0.91
HUANGJINYA18992	0.94	0.6	0.39	-0.04	0.14	-	-	-	-	-0.03	-0.08	-	1.04	1.68
HUANGJINYA20121 (MSP2)	0.62	0.22	-0.02	-0.06	-1.82	-3.3	-1.8	-2.01	-2.82	-0.43	-0.17	0.41	1.25	1.56
HUANGJINYA22654	1.02	0.26	-0.2	-1.1	0.79	-0.91	-	-1.43	-	-1.53	-2.15	1.38	0.46	1.17
HUANGJINYA22655	0.77	-1.68	0.16	0.05	-0.26	-1.74	-1.65	-0.35	-1.67	-0.32	-0.18	1.55	0.24	0.58
HUANGJINYA23775	0.62	-0.47	-0.09	-0.67	-0.34	-0.25	-0.54	-0.39	-0.81	-0.66	-0.37	1.6	-0.68	0.55
HUANGJINYA24155 (ACT7)	0.36	-0.6	-0.1	0.39	0.55	0.82	-2.09	-2.44	-2.94	0.42	-0.97	-1.3	0.96	0.87
HUANGJINYA24499	0.66	-0.01	0.04	0.33	-0.24	-1.5	-2.07	-1.38	-1.9	-0.54	0.4	-0.26	1.2	0.94
HUANGJINYA27756	0.77	-	-2.44	-	-0.41	-0.89	-	-	-	-1.09	1.25	-	2.01	1.98
HUANGJINYA27827	0.51	-1.13	-2.13	0.43	-0.25	-0.47	-4.27	-2.76	-3.04	-0.06	1.63	-0.78	1.12	0.89
HUANGJINYA28248	0.66	-0.62	-0.18	-0.18	-0.03	-0.56	-1.46	-1.41	-1.58	-0.06	0.42	1.21	0.23	0.56
HUANGJINYA28368 (AR2)	0.22	-0.33	-0.55	0.3	-1.24	-0.69	-0.17	-1.01	-0.16	0.01	0.96	-0.01	0.37	0.64
HUANGJINYA28369 (AR2)	-0.0	-0.42	-0.57	0.51	-1.0	-1.18	-0.18	-1.04	0.06	-0.19	1.19	0.41	0.04	0.36
HUANGJINYA28860 (RFR1)	0.27	-0.88	-1.06	-0.42	-0.71	-0.06	-0.73	-0.66	-0.79	-0.23	0.86	0.54	0.67	0.95
HUANGJINYA30726	-0.12	0.3	-0.43	0.48	0.1	-1.51	-0.47	-0.49	-0.84	0.43	0.05	-3.31	0.9	0.96
HUANGJINYA31038 (emb1273)	0.17	-0.05	-0.19	0.19	-0.26	-0.09	-0.46	-0.69	-0.54	-0.02	0.27	0.19	0.43	0.48
HUANGJINYA31208	1.05	-1.01	-0.49	0.24	0.2	0.63	-1.1	-0.79	-3.12	-2.2	-2.26	1.7	-0.1	0.12
HUANGJINYA32596 (ORF102)	0.84	-2.35	-1.0	-0.56	0.05	-	-	-	-	0.54	0.81	1.53	0.66	1.09
HUANGJINYA32597	0.78	-0.76	-0.55	-0.11	0.67	-	-	-	-	0.42	0.21	1.37	0.83	0.73
HUANGJINYA32599	1.23	-1.1	-0.88	-0.58	-0.77	-	-	-	-	0.74	-1.1	2.3	0.23	0.22
HUANGJINYA32724 (TT7)	0.65	0.29	-1.15	-1.29	-5.59	-0.48	-3.86	-3.28	-3.51	0.28	1.67	0.02	0.83	1.11
HUANGJINYA32906 (OTP43)	0.61	-0.57	-0.27	-0.86	-0.33	-0.25	-0.75	-0.44	-1.41	0.66	0.61	-0.18	0.5	0.73
HUANGJINYA34398	2.42	1.0	-0.15	-	-	-	1.47	-	-	-	-	-	1.58	-
HUANGJINYA34717	1.27	-0.64	-0.12	0.16	0.62	-1.75	-1.45	-0.54	-0.86	-0.29	0.09	0.24	0.38	0.14
HUANGJINYA34815 (DRT101)	0.9	-1.07	-1.12	-0.37	-1.39	0.89	-0.43	-0.78	-1.17	0.71	0.15	0.44	0.22	0.22
HUANGJINYA34948	1.1	-1.08	-1.57	1.58	0.3	-2.04	-1.7	-2.49	-1.29	-1.07	-1.98	0.05	0.99	0.96
HUANGJINYA35594	0.08	0.03	0.15	-0.02	-0.41	-0.87	-0.74	-0.72	-1.21	0.25	0.65	-0.94	0.72	0.97
HUANGJINYA36069 (HB-4)	0.27	0.32	-0.27	0.27	-0.9	-0.6	-0.52	-0.67	-0.75	0.3	0.54	0.04	0.41	0.42
HUANGJINYA36102	0.66	-0.06	-0.32	0.05	-0.96	-1.74	-1.02	-0.55	-1.96	-0.38	-0.52	0.5	0.99	1.33
HUANGJINYA36861	0.93	-1.71	-2.31	0.07	0.54	-0.02	-1.42	-0.74	-0.75	-0.44	-1.51	-0.93	1.24	1.35
HUANGJINYA37275	0.97	-1.62	-0.72	0.14	1.44	-2.13	-	-2.06	-2.06	-0.4	0.26	1.02	0.5	0.26
HUANGJINYA38790	0.5	0.47	0.13	-3.52	-4.82	-1.72	-3.23	-4.24	-2.92	1.09	-0.13	0.47	1.34	1.28
HUANGJINYA39199 (ARA7)	0.27	-0.64	-0.19	-0.95	-0.72	-0.38	-1.36	-1.18	-1.02	0.21	0.99	0.54	0.72	0.86
HUANGJINYA43608	0.31	-0.12	-0.21	-0.12	-0.54	0.1	-0.74	-1.22	-0.41	0.75	0.42	0.22	0.28	0.16
HUANGJINYA44222	0.32	-0.62	0.15	-0.6	-1.25	1.03	-1.3	-1.28	-1.13	0.16	0.9	0.56	0.35	-0.21
HUANGJINYA46464	0.23	-2.03	-0.1	0.24	-0.21	-3.21	-	0.08	-2.15	-0.41	1.53	-	0.95	1.41
HUANGJINYA47460	-0.02	-0.36	-0.26	-1.28	-	-	-0.62	-	-	-1.98	1.08	1.38	1.71	1.07
HUANGJINYA47780 (PIC1)	0.63	-0.56	-0.63	-0.3	-0.95	-0.1	-0.74	-1.29	-0.54	0.78	0.62	-0.0	0.5	0.59
HUANGJINYA49286 (VEP1)	0.36	-0.99	-0.26	-0.98	0.11	-0.3	-0.43	-0.55	-0.51	-0.14	1.3	-0.36	0.22	0.62
HUANGJINYA50211	0.46	-1.87	-1.85	-1.21	-0.96	-2.41	-1.75	-1.35	-	-0.18	0.73	0.78	1.59	1.58
HUANGJINYA50238 (ORF102)	0.44	-2.26	-1.37	0.77	0.75	-0.08	-0.98	-1.12	-1.24	-0.5	0.82	-2.92	0.66	1.09
HUANGJINYA50260	0.37	0.05	0.01	0.15	-0.5	0.25	-0.48	-0.32	-0.45	-0.0	0.07	0.41	-0.08	0.1
HUANGJINYA53190 (ACS12)	0.56	0.95	-1.78	0.23	-1.14	-2.26	-1.29	-	-2.25	1.36	-0.65	-	1.16	1.27
HUANGJINYA53948	1.28	-2.16	-0.29	-1.78	0.8	-	-0.17	0.39	0.81	-0.31	-1.23	-	0.97	0.44
HUANGJINYA54282	0.3	0.01	0.53	-0.92	-0.52	-3.17	-2.09	-0.79	-3.1	0.37	0.23	0.54	0.96	1.13
HUANGJINYA54370 (AKINBETA1)	0.21	-0.05	0.19	-0.51	-0.69	0.11	-0.82	-1.25	-0.99	0.7	0.04	0.24	0.64	0.54
HUANGJINYA54597 (ATY53)	0.74	-0.68	-1.12	-0.67	-1.19	0.02	-1.77	-2.46	-1.18	0.04	0.73	0.37	0.91	1.26
HUANGJINYA54963	0.57	-0.5	0.65	0.28	-	-	-	-	-	1.21	0.97	-	0.57	1.7
HUANGJINYA55291	-0.04	-0.51	0.52	0.37	-1.12	-1.27	-2.5	-0.72	-1.21	-0.29	1.03	-3.25	1.07	1.29
HUANGJINYA56408	-0.39	-0.88	0.39	-	-	-	-	-	-	0.54	0.81	1.54	1.78	0.88
HUANGJINYA57565	1.04	0.18	0.38	0.44	0.12	-	-	-	-	0.01	0.06	0.86	0.77	0.58

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.