ZIJUAN04190

Description : Probable helicase MAGATAMA 3 & original description: none

Gene families : OG0019605 (OrthoFinder) Phylogenetic Tree(s): OG0019605_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: ZIJUAN04190
Cluster	HCCA: Cluster_291

Target	Alias	Description	ECC score	Gene Family Method
FUDINGDABAI35693	No alias	Probable helicase MAGATAMA 3 & original description: none	0.03	OrthoFinder
GWHTACFB014412	No alias	Probable helicase MAGATAMA 3 & original description:...	0.05	OrthoFinder
TIEGUANYIN25665	No alias	Probable helicase MAGATAMA 3 & original description: none	0.03	OrthoFinder
FUDINGDABAI35693	No alias	Probable helicase MAGATAMA 3 & original description: none	0.03	OrthoFinder
GWHTACFB014412	No alias	Probable helicase MAGATAMA 3 & original description:...	0.05	OrthoFinder
TIEGUANYIN25665	No alias	Probable helicase MAGATAMA 3 & original description: none	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	IEA	Interproscan
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0002097	tRNA wobble base modification	IEP	HCCA
BP	GO:0002098	tRNA wobble uridine modification	IEP	HCCA
MF	GO:0003989	acetyl-CoA carboxylase activity	IEP	HCCA
MF	GO:0004843	cysteine-type deubiquitinase activity	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005615	extracellular space	IEP	HCCA
CC	GO:0005874	microtubule	IEP	HCCA
CC	GO:0005876	spindle microtubule	IEP	HCCA
BP	GO:0005996	monosaccharide metabolic process	IEP	HCCA
BP	GO:0006006	glucose metabolic process	IEP	HCCA
BP	GO:0006631	fatty acid metabolic process	IEP	HCCA
BP	GO:0006633	fatty acid biosynthetic process	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006813	potassium ion transport	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
BP	GO:0008608	attachment of spindle microtubules to kinetochore	IEP	HCCA
CC	GO:0009317	acetyl-CoA carboxylase complex	IEP	HCCA
MF	GO:0015299	obsolete solute:proton antiporter activity	IEP	HCCA
BP	GO:0015969	guanosine tetraphosphate metabolic process	IEP	HCCA
MF	GO:0016421	CoA carboxylase activity	IEP	HCCA
BP	GO:0016579	protein deubiquitination	IEP	HCCA
MF	GO:0016743	carboxyl- or carbamoyltransferase activity	IEP	HCCA
MF	GO:0016885	ligase activity, forming carbon-carbon bonds	IEP	HCCA
BP	GO:0019318	hexose metabolic process	IEP	HCCA
MF	GO:0019783	ubiquitin-like protein peptidase activity	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
CC	GO:0033588	elongator holoenzyme complex	IEP	HCCA
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0034035	purine ribonucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
CC	GO:0042729	DASH complex	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
MF	GO:0050661	NADP binding	IEP	HCCA
BP	GO:0070646	protein modification by small protein removal	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	HCCA
CC	GO:0099080	supramolecular complex	IEP	HCCA
CC	GO:0099081	supramolecular polymer	IEP	HCCA
CC	GO:0099512	supramolecular fiber	IEP	HCCA
CC	GO:0099513	polymeric cytoskeletal fiber	IEP	HCCA
MF	GO:0101005	deubiquitinase activity	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR041677	DNA2/NAM7_AAA_11	595	671
IPR041677	DNA2/NAM7_AAA_11	243	466
IPR041679	DNA2/NAM7-like_C	679	880

External Links

No external refs found!

ZIJUAN04190

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation