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  3. Camellia sinensis var. assamica cv. 'Zijuan'
  4. Sequence
  5. ZIJUAN24869

ZIJUAN24869


Description : 40S ribosomal protein S12 & original description: none


Gene families : OG0002996 (OrthoFinder) Phylogenetic Tree(s): OG0002996_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ZIJUAN24869
Cluster HCCA: Cluster_403

Target Alias Description ECC score Gene Family Method Actions
ANJIBAICHA11903 No alias 40S ribosomal protein S12 & original description: none 0.08 OrthoFinder
ANJIBAICHA12498 No alias 40S ribosomal protein S12 & original description: none 0.04 OrthoFinder
CSA013803.1 CSA013803 40S ribosomal protein S12 & original description: none 0.06 OrthoFinder
CSA030434.1 CSA030434 40S ribosomal protein S12 & original description: none 0.12 OrthoFinder
CSA033673.1 CSA033673 40S ribosomal protein S12 & original description: none 0.03 OrthoFinder
ECHA03490 No alias 40S ribosomal protein S12 & original description: none 0.09 OrthoFinder
ECHA06774 No alias 40S ribosomal protein S12 & original description: none 0.03 OrthoFinder
FUDINGDABAI03484 No alias 40S ribosomal protein S12 & original description: none 0.09 OrthoFinder
GWHTACFB013744 No alias 40S ribosomal protein S12 & original description:... 0.19 OrthoFinder
GWHTACFB019379 No alias 40S ribosomal protein S12 & original description:... 0.05 OrthoFinder
HUANGJINYA03991 No alias 40S ribosomal protein S12 & original description: none 0.03 OrthoFinder
HUANGJINYA07626 No alias 40S ribosomal protein S12 & original description: none 0.09 OrthoFinder
JINXUAN04892 No alias 40S ribosomal protein S12 & original description: none 0.18 OrthoFinder
JINXUAN10245 No alias 40S ribosomal protein S12 & original description: none 0.03 OrthoFinder
LJCHANGYE06792 No alias 40S ribosomal protein S12 & original description: none 0.07 OrthoFinder
TIEGUANYIN25356 No alias 40S ribosomal protein S12 & original description: none 0.16 OrthoFinder
ZHONGCHA04928 No alias 40S ribosomal protein S12 & original description: none 0.22 OrthoFinder
ZHONGCHA07768 No alias 40S ribosomal protein S12 & original description: none 0.14 OrthoFinder
ANJIBAICHA11903 No alias 40S ribosomal protein S12 & original description: none 0.08 OrthoFinder
ANJIBAICHA12498 No alias 40S ribosomal protein S12 & original description: none 0.04 OrthoFinder
CSA013803.1 CSA013803 40S ribosomal protein S12 & original description: none 0.06 OrthoFinder
CSA030434.1 CSA030434 40S ribosomal protein S12 & original description: none 0.12 OrthoFinder
CSA033673.1 CSA033673 40S ribosomal protein S12 & original description: none 0.03 OrthoFinder
CSS0000337.1 CSS0000337 40S ribosomal protein S12 & original description:... 0.04 OrthoFinder
CSS0019557.1 CSS0019557 40S ribosomal protein S12 & original description:... 0.1 OrthoFinder
ECHA03490 No alias 40S ribosomal protein S12 & original description: none 0.09 OrthoFinder
ECHA06774 No alias 40S ribosomal protein S12 & original description: none 0.03 OrthoFinder
FUDINGDABAI03484 No alias 40S ribosomal protein S12 & original description: none 0.09 OrthoFinder
GWHTACFB013744 No alias 40S ribosomal protein S12 & original description:... 0.19 OrthoFinder
GWHTACFB019379 No alias 40S ribosomal protein S12 & original description:... 0.05 OrthoFinder
HUANGJINYA03991 No alias 40S ribosomal protein S12 & original description: none 0.03 OrthoFinder
HUANGJINYA07626 No alias 40S ribosomal protein S12 & original description: none 0.09 OrthoFinder
JINXUAN04892 No alias 40S ribosomal protein S12 & original description: none 0.18 OrthoFinder
JINXUAN10245 No alias 40S ribosomal protein S12 & original description: none 0.03 OrthoFinder
LJCHANGYE06792 No alias 40S ribosomal protein S12 & original description: none 0.07 OrthoFinder
TIEGUANYIN25356 No alias 40S ribosomal protein S12 & original description: none 0.16 OrthoFinder
ZHONGCHA04928 No alias 40S ribosomal protein S12 & original description: none 0.22 OrthoFinder
ZHONGCHA07768 No alias 40S ribosomal protein S12 & original description: none 0.14 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000387 spliceosomal snRNP assembly IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0022618 protein-RNA complex assembly IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070206 protein trimerization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071826 protein-RNA complex organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004038 Ribosomal_L7Ae/L30e/S12e/Gad45 78 171
No external refs found!