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  3. Camellia sinensis var. assamica cv. 'Zijuan'
  4. Sequence
  5. ZIJUAN25840

ZIJUAN25840


Description : Probable mediator of RNA polymerase II transcription subunit 26b & original description: none


Gene families : OG0007673 (OrthoFinder) Phylogenetic Tree(s): OG0007673_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ZIJUAN25840
Cluster HCCA: Cluster_291

Target Alias Description ECC score Gene Family Method Actions
CSA009172.1 CSA009172 Probable mediator of RNA polymerase II transcription... 0.03 OrthoFinder
FUDINGDABAI24302 No alias Probable mediator of RNA polymerase II transcription... 0.04 OrthoFinder
GWHTACFB007216 No alias Probable mediator of RNA polymerase II transcription... 0.03 OrthoFinder
TIEGUANYIN34794 No alias Probable mediator of RNA polymerase II transcription... 0.04 OrthoFinder
CSA009172.1 CSA009172 Probable mediator of RNA polymerase II transcription... 0.03 OrthoFinder
CSS0002579.1 CSS0002579 Probable mediator of RNA polymerase II transcription... 0.02 OrthoFinder
FUDINGDABAI24302 No alias Probable mediator of RNA polymerase II transcription... 0.04 OrthoFinder
GWHTACFB007216 No alias Probable mediator of RNA polymerase II transcription... 0.03 OrthoFinder
TIEGUANYIN34794 No alias Probable mediator of RNA polymerase II transcription... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004803 transposase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006313 DNA transposition IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016755 aminoacyltransferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
BP GO:0032196 transposition IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR017923 TFIIS_N 162 210
No external refs found!