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  5. ZIJUAN29025

ZIJUAN29025


Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 & original description: none


Gene families : OG0000385 (OrthoFinder) Phylogenetic Tree(s): OG0000385_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ZIJUAN29025
Cluster HCCA: Cluster_576

Target Alias Description ECC score Gene Family Method Actions
ANJIBAICHA39182 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder
FUDINGDABAI15528 No alias Uncharacterized mitochondrial protein AtMg00820 &... 0.09 OrthoFinder
FUDINGDABAI29169 No alias Uncharacterized mitochondrial protein AtMg00820 &... 0.11 OrthoFinder
FUDINGDABAI59838 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.02 OrthoFinder
HUANGJINYA11498 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder
JINXUAN31116 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.11 OrthoFinder
JINXUAN55139 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.06 OrthoFinder
LJCHANGYE55950 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 OrthoFinder
TIEGUANYIN22681 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder
ZHONGCHA17090 ORF170 Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder
ZIJUAN54960 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 OrthoFinder
ANJIBAICHA39182 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder
CSS0018474.1 CSS0018474, CRK8 Retrovirus-related Pol polyprotein from transposon TNT... 0.05 OrthoFinder
CSS0035221.1 CSS0035221 no annotation & original description: gene=CSS0035221 0.03 OrthoFinder
FUDINGDABAI15528 No alias Uncharacterized mitochondrial protein AtMg00820 &... 0.09 OrthoFinder
FUDINGDABAI29169 No alias Uncharacterized mitochondrial protein AtMg00820 &... 0.11 OrthoFinder
FUDINGDABAI59838 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.02 OrthoFinder
HUANGJINYA11498 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder
JINXUAN31116 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.11 OrthoFinder
JINXUAN55139 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.06 OrthoFinder
LJCHANGYE55950 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 OrthoFinder
TIEGUANYIN22681 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder
ZHONGCHA17090 ORF170 Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder
ZIJUAN54960 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!