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  5. ZIJUAN34589

ZIJUAN34589 (CRR4)


Aliases : CRR4

Description : Pentatricopeptide repeat-containing protein At2g45350, chloroplastic & original description: none


Gene families : OG0021638 (OrthoFinder) Phylogenetic Tree(s): OG0021638_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ZIJUAN34589
Cluster HCCA: Cluster_291

Target Alias Description ECC score Gene Family Method Actions
CSA028421.1 CRR4, CSA028421 Pentatricopeptide repeat-containing protein At2g45350,... 0.03 OrthoFinder
FUDINGDABAI06934 CRR4 Pentatricopeptide repeat-containing protein At2g45350,... 0.07 OrthoFinder
GWHTAZTZ019377 CRR4 Pentatricopeptide repeat-containing protein At2g45350,... 0.02 OrthoFinder
HUANGJINYA05238 CRR4 Pentatricopeptide repeat-containing protein At2g45350,... 0.06 OrthoFinder
JINXUAN05503 CRR4 Pentatricopeptide repeat-containing protein At2g45350,... 0.03 OrthoFinder
LJCHANGYE11457 CRR4 Pentatricopeptide repeat-containing protein At2g45350,... 0.08 OrthoFinder
TIEGUANYIN02225 CRR4 Pentatricopeptide repeat-containing protein At2g45350,... 0.05 OrthoFinder
CSA028421.1 CRR4, CSA028421 Pentatricopeptide repeat-containing protein At2g45350,... 0.03 OrthoFinder
CSS0036280.1 CSS0036280, CRR4 Pentatricopeptide repeat-containing protein At2g45350,... 0.03 OrthoFinder
FUDINGDABAI06934 CRR4 Pentatricopeptide repeat-containing protein At2g45350,... 0.07 OrthoFinder
GWHTAZTZ019377 CRR4 Pentatricopeptide repeat-containing protein At2g45350,... 0.02 OrthoFinder
HUANGJINYA05238 CRR4 Pentatricopeptide repeat-containing protein At2g45350,... 0.06 OrthoFinder
JINXUAN05503 CRR4 Pentatricopeptide repeat-containing protein At2g45350,... 0.03 OrthoFinder
LJCHANGYE11457 CRR4 Pentatricopeptide repeat-containing protein At2g45350,... 0.08 OrthoFinder
TIEGUANYIN02225 CRR4 Pentatricopeptide repeat-containing protein At2g45350,... 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0001775 cell activation IEP HCCA
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
BP GO:0002376 immune system process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009092 homoserine metabolic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
CC GO:0009986 cell surface IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019346 transsulfuration IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043545 molybdopterin cofactor metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0045321 leukocyte activation IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0046649 lymphocyte activation IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0050667 homocysteine metabolic process IEP HCCA
BP GO:0051189 prosthetic group metabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071824 protein-DNA complex organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:0140673 transcription elongation-coupled chromatin remodeling IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 313 360
IPR002885 Pentatricopeptide_repeat 88 133
IPR002885 Pentatricopeptide_repeat 416 462
IPR002885 Pentatricopeptide_repeat 161 186
IPR002885 Pentatricopeptide_repeat 391 414
IPR002885 Pentatricopeptide_repeat 491 514
IPR002885 Pentatricopeptide_repeat 254 283
IPR002885 Pentatricopeptide_repeat 222 252
IPR002885 Pentatricopeptide_repeat 189 215
No external refs found!