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  4. Sequence
  5. ECHA37672

ECHA37672


Description : Putative pentatricopeptide repeat-containing protein At1g17630 & original description: none


Gene families : OG0019495 (OrthoFinder) Phylogenetic Tree(s): OG0019495_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ECHA37672
Cluster HCCA: Cluster_278

Target Alias Description ECC score Gene Family Method Actions
CSA002157.1 CSA002157 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder
FUDINGDABAI34692 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder
GWHTAZTZ041842 No alias Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder
HUANGJINYA34228 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder
TIEGUANYIN24487 No alias Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder
ZIJUAN25361 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder
CSA002157.1 CSA002157 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder
CSS0047732.1 CSS0047732 Putative pentatricopeptide repeat-containing protein... 0.07 OrthoFinder
FUDINGDABAI34692 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder
GWHTAZTZ041842 No alias Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder
HUANGJINYA34228 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder
TIEGUANYIN24487 No alias Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder
ZIJUAN25361 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008200 ion channel inhibitor activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009297 pilus assembly IEP HCCA
BP GO:0009399 nitrogen fixation IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015833 peptide transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016247 channel regulator activity IEP HCCA
MF GO:0016248 channel inhibitor activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0017080 sodium channel regulator activity IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 obsolete histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019871 sodium channel inhibitor activity IEP HCCA
BP GO:0030030 cell projection organization IEP HCCA
BP GO:0030031 cell projection assembly IEP HCCA
MF GO:0030701 NAD+-dinitrogen-reductase ADP-D-ribosyltransferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
CC GO:0042151 nematocyst IEP HCCA
BP GO:0042886 amide transport IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0043711 pilus organization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0071941 nitrogen cycle metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0099106 ion channel regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 224 270
IPR002885 Pentatricopeptide_repeat 491 538
IPR002885 Pentatricopeptide_repeat 126 154
IPR002885 Pentatricopeptide_repeat 333 360
IPR002885 Pentatricopeptide_repeat 465 489
IPR002885 Pentatricopeptide_repeat 361 388
IPR002885 Pentatricopeptide_repeat 199 220
IPR002885 Pentatricopeptide_repeat 392 418
No external refs found!