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  5. ECHA57226

ECHA57226 (ATCFM3A, CFM3A)


Aliases : ATCFM3A, CFM3A

Description : CRM-domain containing factor CFM3A, chloroplastic/mitochondrial & original description: none


Gene families : OG0016031 (OrthoFinder) Phylogenetic Tree(s): OG0016031_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ECHA57226
Cluster HCCA: Cluster_278

Target Alias Description ECC score Gene Family Method Actions
FUDINGDABAI54064 ATCFM3A, CFM3A CRM-domain containing factor CFM3A,... 0.02 OrthoFinder
GWHTACFB026192 ATCFM3A, CFM3A CRM-domain containing factor CFM3A,... 0.05 OrthoFinder
HUANGJINYA53227 ATCFM3A, CFM3A CRM-domain containing factor CFM3A,... 0.02 OrthoFinder
JINXUAN57587 ATCFM3A, CFM3A CRM-domain containing factor CFM3A,... 0.1 OrthoFinder
LJCHANGYE62085 ATCFM3A, CFM3A CRM-domain containing factor CFM3A,... 0.02 OrthoFinder
TIEGUANYIN40208 ATCFM3A, CFM3A CRM-domain containing factor CFM3A,... 0.04 OrthoFinder
ZIJUAN05369 ATCFM3A, CFM3A CRM-domain containing factor CFM3A,... 0.04 OrthoFinder
ZIJUAN41478 ATCFM3A, CFM3A CRM-domain containing factor CFM3A,... 0.04 OrthoFinder
CSS0014340.1 CSS0014340,... CRM-domain containing factor CFM3A,... 0.05 OrthoFinder
CSS0047894.1 CSS0047894,... CRM-domain containing factor CFM3A,... 0.03 OrthoFinder
FUDINGDABAI54064 ATCFM3A, CFM3A CRM-domain containing factor CFM3A,... 0.02 OrthoFinder
GWHTACFB026192 ATCFM3A, CFM3A CRM-domain containing factor CFM3A,... 0.05 OrthoFinder
HUANGJINYA53227 ATCFM3A, CFM3A CRM-domain containing factor CFM3A,... 0.02 OrthoFinder
JINXUAN57587 ATCFM3A, CFM3A CRM-domain containing factor CFM3A,... 0.1 OrthoFinder
LJCHANGYE62085 ATCFM3A, CFM3A CRM-domain containing factor CFM3A,... 0.02 OrthoFinder
TIEGUANYIN40208 ATCFM3A, CFM3A CRM-domain containing factor CFM3A,... 0.04 OrthoFinder
ZIJUAN05369 ATCFM3A, CFM3A CRM-domain containing factor CFM3A,... 0.04 OrthoFinder
ZIJUAN41478 ATCFM3A, CFM3A CRM-domain containing factor CFM3A,... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
MF GO:0005179 hormone activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006353 DNA-templated transcription termination IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 DNA damage response IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0009378 four-way junction helicase activity IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030545 signaling receptor regulator activity IEP HCCA
MF GO:0030546 signaling receptor activator activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0048018 receptor ligand activity IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0106370 protein-L-histidine N-pros-methyltransferase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001890 RNA-binding_CRM 250 333
IPR001890 RNA-binding_CRM 670 756
IPR001890 RNA-binding_CRM 456 540
No external refs found!