ECHA61026

Description : Ribosomal RNA small subunit methyltransferase, mitochondrial & original description: none

Gene families : OG0006236 (OrthoFinder) Phylogenetic Tree(s): OG0006236_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: ECHA61026
Cluster	HCCA: Cluster_278

Target	Alias	Description	ECC score	Gene Family Method	Actions
CSS0045783.1	CSS0045783	Ribosomal RNA small subunit methyltransferase,...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0001510	RNA methylation	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	IEA	Interproscan
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006400	tRNA modification	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008033	tRNA processing	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	IEA	Interproscan
MF	GO:0008170	N-methyltransferase activity	None	Extended
MF	GO:0008171	O-methyltransferase activity	IEA	Interproscan
MF	GO:0008173	RNA methyltransferase activity	IEA	Interproscan
MF	GO:0008175	tRNA methyltransferase activity	None	Extended
MF	GO:0008176	tRNA (guanine-N7-)-methyltransferase activity	IEA	Interproscan
MF	GO:0008276	protein methyltransferase activity	None	Extended
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	None	Extended
BP	GO:0009451	RNA modification	None	Extended
BP	GO:0009452	7-methylguanosine RNA capping	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016423	tRNA (guanine) methyltransferase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0036260	RNA capping	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0106370	protein-L-histidine N-pros-methyltransferase activity	IEA	Interproscan
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	IEP	HCCA
MF	GO:0003905	alkylbase DNA N-glycosylase activity	IEP	HCCA
MF	GO:0004176	ATP-dependent peptidase activity	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0004683	calmodulin-dependent protein kinase activity	IEP	HCCA
MF	GO:0005213	structural constituent of egg chorion	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005516	calmodulin binding	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006284	base-excision repair	IEP	HCCA
BP	GO:0006417	regulation of translation	IEP	HCCA
BP	GO:0006974	DNA damage response	IEP	HCCA
BP	GO:0007304	chorion-containing eggshell formation	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
MF	GO:0008725	DNA-3-methyladenine glycosylase activity	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0010608	post-transcriptional regulation of gene expression	IEP	HCCA
BP	GO:0010941	regulation of cell death	IEP	HCCA
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
MF	GO:0019104	DNA N-glycosylase activity	IEP	HCCA
CC	GO:0030312	external encapsulating structure	IEP	HCCA
BP	GO:0030703	eggshell formation	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0034248	regulation of amide metabolic process	IEP	HCCA
CC	GO:0042600	egg chorion	IEP	HCCA
BP	GO:0042981	regulation of apoptotic process	IEP	HCCA
BP	GO:0043067	regulation of programmed cell death	IEP	HCCA
MF	GO:0043733	DNA-3-methylbase glycosylase activity	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
BP	GO:0048646	anatomical structure formation involved in morphogenesis	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051246	regulation of protein metabolic process	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001737	KsgA/Erm	56	285

External Links

No external refs found!

ECHA61026

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation