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  5. HUANGJINYA00864

HUANGJINYA00864 (PYRB)


Aliases : PYRB

Description : Aspartate carbamoyltransferase 3, chloroplastic & original description: none


Gene families : OG0005893 (OrthoFinder) Phylogenetic Tree(s): OG0005893_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: HUANGJINYA00864
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
CSA011717.1 PYRB, CSA011717 Aspartate carbamoyltransferase 2, chloroplastic &... 0.03 OrthoFinder
FUDINGDABAI00843 PYRB Aspartate carbamoyltransferase 2, chloroplastic &... 0.03 OrthoFinder
TIEGUANYIN46852 PYRB Aspartate carbamoyltransferase 2, chloroplastic &... 0.03 OrthoFinder
ZHONGCHA00603 PYRB Aspartate carbamoyltransferase 2, chloroplastic &... 0.03 OrthoFinder
CSA011717.1 PYRB, CSA011717 Aspartate carbamoyltransferase 2, chloroplastic &... 0.03 OrthoFinder
CSS0017930.1 PYRB, CSS0017930 Aspartate carbamoyltransferase 2, chloroplastic &... 0.03 OrthoFinder
FUDINGDABAI00843 PYRB Aspartate carbamoyltransferase 2, chloroplastic &... 0.03 OrthoFinder
TIEGUANYIN46852 PYRB Aspartate carbamoyltransferase 2, chloroplastic &... 0.03 OrthoFinder
ZHONGCHA00603 PYRB Aspartate carbamoyltransferase 2, chloroplastic &... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEA Interproscan
BP GO:0006520 amino acid metabolic process IEA Interproscan
MF GO:0016597 amino acid binding IEA Interproscan
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000372 Group I intron splicing IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000376 RNA splicing, via transesterification reactions with guanosine as nucleophile IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006274 DNA replication termination IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051087 protein-folding chaperone binding IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR006131 Asp_carbamoyltransf_Asp/Orn-bd 243 394
IPR006132 Asp/Orn_carbamoyltranf_P-bd 96 236
No external refs found!