HUANGJINYA07232

Description : DEAD-box ATP-dependent RNA helicase 31 & original description: none

Gene families : OG0003276 (OrthoFinder) Phylogenetic Tree(s): OG0003276_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: HUANGJINYA07232
Cluster	HCCA: Cluster_271

Target	Alias	Description	ECC score	Gene Family Method
FUDINGDABAI05081	No alias	DEAD-box ATP-dependent RNA helicase 31 & original...	0.11	OrthoFinder
FUDINGDABAI47013	No alias	DEAD-box ATP-dependent RNA helicase 31 & original...	0.12	OrthoFinder
GWHTACFB011124	No alias	DEAD-box ATP-dependent RNA helicase 31 & original...	0.04	OrthoFinder
GWHTAZTZ010284	No alias	DEAD-box ATP-dependent RNA helicase 31 & original...	0.04	OrthoFinder
GWHTAZTZ019038	No alias	DEAD-box ATP-dependent RNA helicase 31 & original...	0.04	OrthoFinder
JINXUAN08539	No alias	DEAD-box ATP-dependent RNA helicase 31 & original...	0.07	OrthoFinder
LJCHANGYE07753	No alias	DEAD-box ATP-dependent RNA helicase 31 & original...	0.05	OrthoFinder
TIEGUANYIN01527	No alias	DEAD-box ATP-dependent RNA helicase 31 & original...	0.06	OrthoFinder
TIEGUANYIN35344	No alias	DEAD-box ATP-dependent RNA helicase 31 & original...	0.04	OrthoFinder
ZHONGCHA52510	No alias	DEAD-box ATP-dependent RNA helicase 31 & original...	0.03	OrthoFinder
ZIJUAN30757	No alias	DEAD-box ATP-dependent RNA helicase 26 & original...	0.06	OrthoFinder
CSS0024185.1	CSS0024185	DEAD-box ATP-dependent RNA helicase 31 & original...	0.07	OrthoFinder
CSS0038347.1	CSS0038347	DEAD-box ATP-dependent RNA helicase 31 & original...	0.1	OrthoFinder
FUDINGDABAI05081	No alias	DEAD-box ATP-dependent RNA helicase 31 & original...	0.11	OrthoFinder
FUDINGDABAI47013	No alias	DEAD-box ATP-dependent RNA helicase 31 & original...	0.12	OrthoFinder
GWHTACFB011124	No alias	DEAD-box ATP-dependent RNA helicase 31 & original...	0.04	OrthoFinder
GWHTAZTZ010284	No alias	DEAD-box ATP-dependent RNA helicase 31 & original...	0.04	OrthoFinder
GWHTAZTZ019038	No alias	DEAD-box ATP-dependent RNA helicase 31 & original...	0.04	OrthoFinder
JINXUAN08539	No alias	DEAD-box ATP-dependent RNA helicase 31 & original...	0.07	OrthoFinder
LJCHANGYE07753	No alias	DEAD-box ATP-dependent RNA helicase 31 & original...	0.05	OrthoFinder
TIEGUANYIN01527	No alias	DEAD-box ATP-dependent RNA helicase 31 & original...	0.06	OrthoFinder
TIEGUANYIN35344	No alias	DEAD-box ATP-dependent RNA helicase 31 & original...	0.04	OrthoFinder
ZHONGCHA52510	No alias	DEAD-box ATP-dependent RNA helicase 31 & original...	0.03	OrthoFinder
ZIJUAN30757	No alias	DEAD-box ATP-dependent RNA helicase 26 & original...	0.06	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006352	DNA-templated transcription initiation	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006357	regulation of transcription by RNA polymerase II	None	Extended
BP	GO:0006367	transcription initiation at RNA polymerase II promoter	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
BP	GO:0032784	regulation of DNA-templated transcription elongation	None	Extended
BP	GO:0032786	positive regulation of DNA-templated transcription, elongation	None	Extended
BP	GO:0032968	positive regulation of transcription elongation by RNA polymerase II	IEA	Interproscan
BP	GO:0034243	regulation of transcription elongation by RNA polymerase II	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0045893	positive regulation of DNA-templated transcription	None	Extended
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0045944	positive regulation of transcription by RNA polymerase II	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
MF	GO:0003916	DNA topoisomerase activity	IEP	HCCA
MF	GO:0003918	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity	IEP	HCCA
CC	GO:0005741	mitochondrial outer membrane	IEP	HCCA
BP	GO:0006265	DNA topological change	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
BP	GO:0009890	negative regulation of biosynthetic process	IEP	HCCA
BP	GO:0009892	negative regulation of metabolic process	IEP	HCCA
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
CC	GO:0019867	outer membrane	IEP	HCCA
CC	GO:0030117	membrane coat	IEP	HCCA
CC	GO:0030684	preribosome	IEP	HCCA
BP	GO:0031324	negative regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031327	negative regulation of cellular biosynthetic process	IEP	HCCA
CC	GO:0031966	mitochondrial membrane	IEP	HCCA
CC	GO:0031968	organelle outer membrane	IEP	HCCA
CC	GO:0032040	small-subunit processome	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
BP	GO:0045892	negative regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
BP	GO:0048519	negative regulation of biological process	IEP	HCCA
BP	GO:0048523	negative regulation of cellular process	IEP	HCCA
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051253	negative regulation of RNA metabolic process	IEP	HCCA
BP	GO:0071103	DNA conformation change	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA
BP	GO:1902679	negative regulation of RNA biosynthetic process	IEP	HCCA
BP	GO:1903507	negative regulation of nucleic acid-templated transcription	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	181	358
IPR001650	Helicase_C	403	509

External Links

No external refs found!

HUANGJINYA07232

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation