HUANGJINYA12715 (GCH, ATGCH, RFD1, ATRIBA1)

Aliases : GCH, ATGCH, RFD1, ATRIBA1

Description : Bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic & original description: none

Gene families : OG0018482 (OrthoFinder) Phylogenetic Tree(s): OG0018482_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: HUANGJINYA12715
Cluster	HCCA: Cluster_26

Target	Alias	Description	ECC score	Gene Family Method
CSA023855.1	GCH, CSA023855,...	Bifunctional riboflavin biosynthesis protein RIBA 1,...	0.08	OrthoFinder
ECHA13455	GCH, ATGCH, RFD1, ATRIBA1	Bifunctional riboflavin biosynthesis protein RIBA 1,...	0.02	OrthoFinder
GWHTAZTZ038738	GCH, ATGCH, RFD1, ATRIBA1	Bifunctional riboflavin biosynthesis protein RIBA 1,...	0.05	OrthoFinder
JINXUAN14631	GCH, ATGCH, RFD1, ATRIBA1	Bifunctional riboflavin biosynthesis protein RIBA 1,...	0.02	OrthoFinder
CSA023855.1	GCH, CSA023855,...	Bifunctional riboflavin biosynthesis protein RIBA 1,...	0.08	OrthoFinder
CSS0009365.1	CSS0009365,...	Bifunctional riboflavin biosynthesis protein RIBA 1,...	0.03	OrthoFinder
ECHA13455	GCH, ATGCH, RFD1, ATRIBA1	Bifunctional riboflavin biosynthesis protein RIBA 1,...	0.02	OrthoFinder
GWHTAZTZ038738	GCH, ATGCH, RFD1, ATRIBA1	Bifunctional riboflavin biosynthesis protein RIBA 1,...	0.05	OrthoFinder
JINXUAN14631	GCH, ATGCH, RFD1, ATRIBA1	Bifunctional riboflavin biosynthesis protein RIBA 1,...	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006766	vitamin metabolic process	None	Extended
BP	GO:0006767	water-soluble vitamin metabolic process	None	Extended
BP	GO:0006771	riboflavin metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008686	3,4-dihydroxy-2-butanone-4-phosphate synthase activity	IEA	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009110	vitamin biosynthetic process	None	Extended
BP	GO:0009231	riboflavin biosynthetic process	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042364	water-soluble vitamin biosynthetic process	None	Extended
BP	GO:0042726	flavin-containing compound metabolic process	None	Extended
BP	GO:0042727	flavin-containing compound biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004620	phospholipase activity	IEP	HCCA
MF	GO:0004806	triglyceride lipase activity	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	HCCA
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	HCCA
BP	GO:0007186	G protein-coupled receptor signaling pathway	IEP	HCCA
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	HCCA
MF	GO:0016298	lipase activity	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA
MF	GO:0031683	G-protein beta/gamma-subunit complex binding	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
BP	GO:0033013	tetrapyrrole metabolic process	IEP	HCCA
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
MF	GO:0050290	sphingomyelin phosphodiesterase D activity	IEP	HCCA
MF	GO:0050525	cutinase activity	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR032677	GTP_cyclohydro_II	344	509
IPR000422	DHBP_synthase_RibB	141	333

External Links

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HUANGJINYA12715 (GCH, ATGCH, RFD1, ATRIBA1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation