HUANGJINYA14941 (EMB2296)

Aliases : EMB2296

Description : 60S ribosomal protein L8 & original description: none

Gene families : OG0003657 (OrthoFinder) Phylogenetic Tree(s): OG0003657_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: HUANGJINYA14941
Cluster	HCCA: Cluster_147

Target	Alias	Description	ECC score	Gene Family Method
FUDINGDABAI16079	EMB2296	60S ribosomal protein L8 & original description: none	0.04	OrthoFinder
FUDINGDABAI60579	EMB2296	60S ribosomal protein L8 & original description: none	0.04	OrthoFinder
GWHTACFB031506	EMB2296	60S ribosomal protein L8 & original description:...	0.05	OrthoFinder
TIEGUANYIN08689	EMB2296	60S ribosomal protein L8 & original description: none	0.05	OrthoFinder
TIEGUANYIN47704	EMB2296	60S ribosomal protein L8 & original description: none	0.05	OrthoFinder
ZHONGCHA17185	EMB2296	60S ribosomal protein L8 & original description: none	0.04	OrthoFinder
FUDINGDABAI16079	EMB2296	60S ribosomal protein L8 & original description: none	0.04	OrthoFinder
FUDINGDABAI60579	EMB2296	60S ribosomal protein L8 & original description: none	0.04	OrthoFinder
GWHTACFB031506	EMB2296	60S ribosomal protein L8 & original description:...	0.05	OrthoFinder
TIEGUANYIN08689	EMB2296	60S ribosomal protein L8 & original description: none	0.05	OrthoFinder
TIEGUANYIN47704	EMB2296	60S ribosomal protein L8 & original description: none	0.05	OrthoFinder
ZHONGCHA17185	EMB2296	60S ribosomal protein L8 & original description: none	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEP	HCCA
BP	GO:0008380	RNA splicing	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	HCCA
CC	GO:0035145	exon-exon junction complex	IEP	HCCA
BP	GO:0042254	ribosome biogenesis	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR022666	Rbsml_prot_L2_RNA-bd_dom	13	89
IPR022669	Ribosomal_L2_C	98	224

External Links

No external refs found!

HUANGJINYA14941 (EMB2296)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation