HUANGJINYA45673

Description : Pentatricopeptide repeat-containing protein At5g65560 & original description: none

Gene families : OG0012856 (OrthoFinder) Phylogenetic Tree(s): OG0012856_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: HUANGJINYA45673
Cluster	HCCA: Cluster_34

Target	Alias	Description	ECC score	Gene Family Method
LJCHANGYE62330	No alias	Pentatricopeptide repeat-containing protein At5g65560 &...	0.06	OrthoFinder
ZIJUAN47314	No alias	Pentatricopeptide repeat-containing protein At5g65560 &...	0.05	OrthoFinder
LJCHANGYE62330	No alias	Pentatricopeptide repeat-containing protein At5g65560 &...	0.06	OrthoFinder
ZIJUAN47314	No alias	Pentatricopeptide repeat-containing protein At5g65560 &...	0.05	OrthoFinder

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0003678	DNA helicase activity	IEP	HCCA
MF	GO:0003697	single-stranded DNA binding	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
CC	GO:0005739	mitochondrion	IEP	HCCA
CC	GO:0005869	dynactin complex	IEP	HCCA
CC	GO:0005875	microtubule associated complex	IEP	HCCA
BP	GO:0016032	viral process	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
CC	GO:0019031	viral envelope	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
CC	GO:0036338	viral membrane	IEP	HCCA
CC	GO:0044423	virion component	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	343	384
IPR002885	Pentatricopeptide_repeat	309	337

External Links

No external refs found!