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  3. Camellia sinensis var. sinensis cv. 'Huangjinya'
  4. Sequence
  5. HUANGJINYA53116

HUANGJINYA53116


Description : no annotation & original description: none


Gene families : OG0003046 (OrthoFinder) Phylogenetic Tree(s): OG0003046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: HUANGJINYA53116
Cluster HCCA: Cluster_343

Target Alias Description ECC score Gene Family Method Actions
FUDINGDABAI51795 No alias no annotation & original description: none 0.02 OrthoFinder
LJCHANGYE61038 No alias no annotation & original description: none 0.03 OrthoFinder
LJCHANGYE61042 No alias no annotation & original description: none 0.03 OrthoFinder
TIEGUANYIN40333 No alias no annotation & original description: none 0.02 OrthoFinder
ZHONGCHA27905 No alias H/ACA ribonucleoprotein complex subunit 4 & original... 0.03 OrthoFinder
FUDINGDABAI51795 No alias no annotation & original description: none 0.02 OrthoFinder
LJCHANGYE61038 No alias no annotation & original description: none 0.03 OrthoFinder
LJCHANGYE61042 No alias no annotation & original description: none 0.03 OrthoFinder
TIEGUANYIN40333 No alias no annotation & original description: none 0.02 OrthoFinder
ZHONGCHA27905 No alias H/ACA ribonucleoprotein complex subunit 4 & original... 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0002949 tRNA threonylcarbamoyladenosine modification IEP HCCA
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004555 alpha,alpha-trehalase activity IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006282 regulation of DNA repair IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
MF GO:0015049 methane monooxygenase activity IEP HCCA
MF GO:0015927 trehalase activity IEP HCCA
BP GO:0015947 methane metabolic process IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043446 cellular alkane metabolic process IEP HCCA
BP GO:0045738 negative regulation of DNA repair IEP HCCA
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048585 negative regulation of response to stimulus IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051053 negative regulation of DNA metabolic process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0070525 tRNA threonylcarbamoyladenosine metabolic process IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0080135 regulation of cellular response to stress IEP HCCA
BP GO:0120252 hydrocarbon metabolic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:2000779 regulation of double-strand break repair IEP HCCA
BP GO:2000780 negative regulation of double-strand break repair IEP HCCA
BP GO:2001032 regulation of double-strand break repair via nonhomologous end joining IEP HCCA
BP GO:2001033 negative regulation of double-strand break repair via nonhomologous end joining IEP HCCA
InterPro domains Description Start Stop
IPR002501 PsdUridine_synth_N 294 353
No external refs found!