1. Home
  2. Species
  3. Camellia sinensis var. sinensis cv. 'Jinxuan'
  4. Sequence
  5. JINXUAN04892

JINXUAN04892


Description : 40S ribosomal protein S12 & original description: none


Gene families : OG0002996 (OrthoFinder) Phylogenetic Tree(s): OG0002996_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: JINXUAN04892
Cluster HCCA: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
ANJIBAICHA11903 No alias 40S ribosomal protein S12 & original description: none 0.07 OrthoFinder
ANJIBAICHA12498 No alias 40S ribosomal protein S12 & original description: none 0.03 OrthoFinder
CSA013803.1 CSA013803 40S ribosomal protein S12 & original description: none 0.04 OrthoFinder
CSA030434.1 CSA030434 40S ribosomal protein S12 & original description: none 0.19 OrthoFinder
CSA033673.1 CSA033673 40S ribosomal protein S12 & original description: none 0.05 OrthoFinder
ECHA03490 No alias 40S ribosomal protein S12 & original description: none 0.15 OrthoFinder
FUDINGDABAI03484 No alias 40S ribosomal protein S12 & original description: none 0.25 OrthoFinder
GWHTACFB013744 No alias 40S ribosomal protein S12 & original description:... 0.26 OrthoFinder
GWHTACFB019379 No alias 40S ribosomal protein S12 & original description:... 0.07 OrthoFinder
HUANGJINYA03991 No alias 40S ribosomal protein S12 & original description: none 0.11 OrthoFinder
HUANGJINYA07626 No alias 40S ribosomal protein S12 & original description: none 0.06 OrthoFinder
JINXUAN10245 No alias 40S ribosomal protein S12 & original description: none 0.05 OrthoFinder
TIEGUANYIN01985 No alias 40S ribosomal protein S12 & original description: none 0.02 OrthoFinder
TIEGUANYIN25356 No alias 40S ribosomal protein S12 & original description: none 0.12 OrthoFinder
ZHONGCHA04928 No alias 40S ribosomal protein S12 & original description: none 0.37 OrthoFinder
ZHONGCHA07768 No alias 40S ribosomal protein S12 & original description: none 0.18 OrthoFinder
ZIJUAN24869 No alias 40S ribosomal protein S12 & original description: none 0.18 OrthoFinder
ANJIBAICHA11903 No alias 40S ribosomal protein S12 & original description: none 0.07 OrthoFinder
ANJIBAICHA12498 No alias 40S ribosomal protein S12 & original description: none 0.03 OrthoFinder
CSA013803.1 CSA013803 40S ribosomal protein S12 & original description: none 0.04 OrthoFinder
CSA030434.1 CSA030434 40S ribosomal protein S12 & original description: none 0.19 OrthoFinder
CSA033673.1 CSA033673 40S ribosomal protein S12 & original description: none 0.05 OrthoFinder
CSS0000337.1 CSS0000337 40S ribosomal protein S12 & original description:... 0.2 OrthoFinder
CSS0019557.1 CSS0019557 40S ribosomal protein S12 & original description:... 0.28 OrthoFinder
CSS0026119.1 CSS0026119 40S ribosomal protein S12 & original description:... 0.04 OrthoFinder
ECHA03490 No alias 40S ribosomal protein S12 & original description: none 0.15 OrthoFinder
FUDINGDABAI03484 No alias 40S ribosomal protein S12 & original description: none 0.25 OrthoFinder
GWHTACFB013744 No alias 40S ribosomal protein S12 & original description:... 0.26 OrthoFinder
GWHTACFB019379 No alias 40S ribosomal protein S12 & original description:... 0.07 OrthoFinder
HUANGJINYA03991 No alias 40S ribosomal protein S12 & original description: none 0.11 OrthoFinder
HUANGJINYA07626 No alias 40S ribosomal protein S12 & original description: none 0.06 OrthoFinder
JINXUAN10245 No alias 40S ribosomal protein S12 & original description: none 0.05 OrthoFinder
TIEGUANYIN01985 No alias 40S ribosomal protein S12 & original description: none 0.02 OrthoFinder
TIEGUANYIN25356 No alias 40S ribosomal protein S12 & original description: none 0.12 OrthoFinder
ZHONGCHA04928 No alias 40S ribosomal protein S12 & original description: none 0.37 OrthoFinder
ZHONGCHA07768 No alias 40S ribosomal protein S12 & original description: none 0.18 OrthoFinder
ZIJUAN24869 No alias 40S ribosomal protein S12 & original description: none 0.18 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000387 spliceosomal snRNP assembly IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006366 transcription by RNA polymerase II IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 protein-RNA complex assembly IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070206 protein trimerization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071826 protein-RNA complex organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004038 Ribosomal_L7Ae/L30e/S12e/Gad45 30 123
No external refs found!