1. Home
  2. Species
  3. Camellia sinensis var. sinensis cv. 'Jinxuan'
  4. Sequence
  5. JINXUAN06447

JINXUAN06447


Description : Protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1 & original description: none


Gene families : OG0017268 (OrthoFinder) Phylogenetic Tree(s): OG0017268_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: JINXUAN06447
Cluster HCCA: Cluster_498

Target Alias Description ECC score Gene Family Method Actions
CSA029968.1 CSA029968 Protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1 &... 0.07 OrthoFinder
FUDINGDABAI05618 No alias Protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1 &... 0.03 OrthoFinder
GWHTACFB021224 No alias Protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1 &... 0.04 OrthoFinder
HUANGJINYA05627 No alias Protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1 &... 0.03 OrthoFinder
LJCHANGYE09411 No alias Protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1 &... 0.03 OrthoFinder
TIEGUANYIN00724 No alias Protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1 &... 0.04 OrthoFinder
CSA029968.1 CSA029968 Protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1 &... 0.07 OrthoFinder
FUDINGDABAI05618 No alias Protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1 &... 0.03 OrthoFinder
GWHTACFB021224 No alias Protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1 &... 0.04 OrthoFinder
HUANGJINYA05627 No alias Protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1 &... 0.03 OrthoFinder
LJCHANGYE09411 No alias Protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1 &... 0.03 OrthoFinder
TIEGUANYIN00724 No alias Protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1 &... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002949 tRNA threonylcarbamoyladenosine modification IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0009378 four-way junction helicase activity IEP HCCA
BP GO:0019079 viral genome replication IEP HCCA
BP GO:0020035 adhesion of symbiont to microvasculature IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
BP GO:0044403 biological process involved in symbiotic interaction IEP HCCA
BP GO:0044406 adhesion of symbiont to host IEP HCCA
BP GO:0044650 adhesion of symbiont to host cell IEP HCCA
BP GO:0051701 biological process involved in interaction with host IEP HCCA
BP GO:0070525 tRNA threonylcarbamoyladenosine metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
InterPro domains Description Start Stop
IPR003169 GYF 566 611
No external refs found!