1. Home
  2. Species
  3. Camellia sinensis var. sinensis cv. 'Jinxuan'
  4. Sequence
  5. JINXUAN10245

JINXUAN10245


Description : 40S ribosomal protein S12 & original description: none


Gene families : OG0002996 (OrthoFinder) Phylogenetic Tree(s): OG0002996_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: JINXUAN10245
Cluster HCCA: Cluster_278

Target Alias Description ECC score Gene Family Method Actions
ANJIBAICHA11903 No alias 40S ribosomal protein S12 & original description: none 0.02 OrthoFinder
ANJIBAICHA12498 No alias 40S ribosomal protein S12 & original description: none 0.03 OrthoFinder
CSA013803.1 CSA013803 40S ribosomal protein S12 & original description: none 0.04 OrthoFinder
CSA030434.1 CSA030434 40S ribosomal protein S12 & original description: none 0.06 OrthoFinder
CSA033673.1 CSA033673 40S ribosomal protein S12 & original description: none 0.05 OrthoFinder
ECHA03490 No alias 40S ribosomal protein S12 & original description: none 0.07 OrthoFinder
ECHA06774 No alias 40S ribosomal protein S12 & original description: none 0.08 OrthoFinder
FUDINGDABAI03484 No alias 40S ribosomal protein S12 & original description: none 0.07 OrthoFinder
FUDINGDABAI06986 No alias 40S ribosomal protein S12 & original description: none 0.04 OrthoFinder
GWHTACFB013744 No alias 40S ribosomal protein S12 & original description:... 0.1 OrthoFinder
HUANGJINYA03991 No alias 40S ribosomal protein S12 & original description: none 0.11 OrthoFinder
HUANGJINYA07626 No alias 40S ribosomal protein S12 & original description: none 0.06 OrthoFinder
JINXUAN04892 No alias 40S ribosomal protein S12 & original description: none 0.05 OrthoFinder
LJCHANGYE06792 No alias 40S ribosomal protein S12 & original description: none 0.06 OrthoFinder
LJCHANGYE10527 No alias 40S ribosomal protein S12 & original description: none 0.03 OrthoFinder
TIEGUANYIN01985 No alias 40S ribosomal protein S12 & original description: none 0.08 OrthoFinder
TIEGUANYIN25356 No alias 40S ribosomal protein S12 & original description: none 0.06 OrthoFinder
ZHONGCHA04928 No alias 40S ribosomal protein S12 & original description: none 0.06 OrthoFinder
ZHONGCHA07768 No alias 40S ribosomal protein S12 & original description: none 0.03 OrthoFinder
ZIJUAN24869 No alias 40S ribosomal protein S12 & original description: none 0.03 OrthoFinder
ZIJUAN53081 No alias 40S ribosomal protein S12 & original description: none 0.03 OrthoFinder
ANJIBAICHA11903 No alias 40S ribosomal protein S12 & original description: none 0.02 OrthoFinder
ANJIBAICHA12498 No alias 40S ribosomal protein S12 & original description: none 0.03 OrthoFinder
CSA013803.1 CSA013803 40S ribosomal protein S12 & original description: none 0.04 OrthoFinder
CSA030434.1 CSA030434 40S ribosomal protein S12 & original description: none 0.06 OrthoFinder
CSA033673.1 CSA033673 40S ribosomal protein S12 & original description: none 0.05 OrthoFinder
CSS0000337.1 CSS0000337 40S ribosomal protein S12 & original description:... 0.06 OrthoFinder
CSS0019557.1 CSS0019557 40S ribosomal protein S12 & original description:... 0.05 OrthoFinder
CSS0026119.1 CSS0026119 40S ribosomal protein S12 & original description:... 0.04 OrthoFinder
ECHA03490 No alias 40S ribosomal protein S12 & original description: none 0.07 OrthoFinder
ECHA06774 No alias 40S ribosomal protein S12 & original description: none 0.08 OrthoFinder
FUDINGDABAI03484 No alias 40S ribosomal protein S12 & original description: none 0.07 OrthoFinder
FUDINGDABAI06986 No alias 40S ribosomal protein S12 & original description: none 0.04 OrthoFinder
GWHTACFB013744 No alias 40S ribosomal protein S12 & original description:... 0.1 OrthoFinder
HUANGJINYA03991 No alias 40S ribosomal protein S12 & original description: none 0.11 OrthoFinder
HUANGJINYA07626 No alias 40S ribosomal protein S12 & original description: none 0.06 OrthoFinder
JINXUAN04892 No alias 40S ribosomal protein S12 & original description: none 0.05 OrthoFinder
LJCHANGYE06792 No alias 40S ribosomal protein S12 & original description: none 0.06 OrthoFinder
LJCHANGYE10527 No alias 40S ribosomal protein S12 & original description: none 0.03 OrthoFinder
TIEGUANYIN01985 No alias 40S ribosomal protein S12 & original description: none 0.08 OrthoFinder
TIEGUANYIN25356 No alias 40S ribosomal protein S12 & original description: none 0.06 OrthoFinder
ZHONGCHA04928 No alias 40S ribosomal protein S12 & original description: none 0.06 OrthoFinder
ZHONGCHA07768 No alias 40S ribosomal protein S12 & original description: none 0.03 OrthoFinder
ZIJUAN24869 No alias 40S ribosomal protein S12 & original description: none 0.03 OrthoFinder
ZIJUAN53081 No alias 40S ribosomal protein S12 & original description: none 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0032784 regulation of DNA-templated transcription elongation IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0106370 protein-L-histidine N-pros-methyltransferase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004038 Ribosomal_L7Ae/L30e/S12e/Gad45 30 123
No external refs found!