JINXUAN15967 (EMB2296)

Aliases : EMB2296

Description : 60S ribosomal protein L8 & original description: none

Gene families : OG0003657 (OrthoFinder) Phylogenetic Tree(s): OG0003657_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: JINXUAN15967
Cluster	HCCA: Cluster_129

Target	Alias	Description	ECC score	Gene Family Method
FUDINGDABAI16079	EMB2296	60S ribosomal protein L8 & original description: none	0.05	OrthoFinder
GWHTACFB031506	EMB2296	60S ribosomal protein L8 & original description:...	0.05	OrthoFinder
HUANGJINYA01969	EMB2296	60S ribosomal protein L8 & original description: none	0.05	OrthoFinder
LJCHANGYE04501	EMB2296	60S ribosomal protein L8 & original description: none	0.05	OrthoFinder
TIEGUANYIN08689	EMB2296	60S ribosomal protein L8 & original description: none	0.12	OrthoFinder
TIEGUANYIN47704	EMB2296	60S ribosomal protein L8 & original description: none	0.06	OrthoFinder
CSS0005345.1	CSS0005345, EMB2296	60S ribosomal protein L8 & original description: gene=CSS0005345	0.05	OrthoFinder
FUDINGDABAI16079	EMB2296	60S ribosomal protein L8 & original description: none	0.05	OrthoFinder
GWHTACFB031506	EMB2296	60S ribosomal protein L8 & original description:...	0.05	OrthoFinder
HUANGJINYA01969	EMB2296	60S ribosomal protein L8 & original description: none	0.05	OrthoFinder
LJCHANGYE04501	EMB2296	60S ribosomal protein L8 & original description: none	0.05	OrthoFinder
TIEGUANYIN08689	EMB2296	60S ribosomal protein L8 & original description: none	0.12	OrthoFinder
TIEGUANYIN47704	EMB2296	60S ribosomal protein L8 & original description: none	0.06	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000105	histidine biosynthetic process	IEP	HCCA
BP	GO:0000387	spliceosomal snRNP assembly	IEP	HCCA
BP	GO:0001510	RNA methylation	IEP	HCCA
MF	GO:0003922	GMP synthase (glutamine-hydrolyzing) activity	IEP	HCCA
MF	GO:0004359	glutaminase activity	IEP	HCCA
MF	GO:0004497	monooxygenase activity	IEP	HCCA
MF	GO:0004810	CCA tRNA nucleotidyltransferase activity	IEP	HCCA
BP	GO:0006081	cellular aldehyde metabolic process	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006177	GMP biosynthetic process	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006400	tRNA modification	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006547	histidine metabolic process	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006766	vitamin metabolic process	IEP	HCCA
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0008033	tRNA processing	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0008173	RNA methyltransferase activity	IEP	HCCA
MF	GO:0008175	tRNA methyltransferase activity	IEP	HCCA
BP	GO:0008652	amino acid biosynthetic process	IEP	HCCA
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	HCCA
BP	GO:0009110	vitamin biosynthetic process	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009123	nucleoside monophosphate metabolic process	IEP	HCCA
BP	GO:0009124	nucleoside monophosphate biosynthetic process	IEP	HCCA
BP	GO:0009126	purine nucleoside monophosphate metabolic process	IEP	HCCA
BP	GO:0009127	purine nucleoside monophosphate biosynthetic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009156	ribonucleoside monophosphate biosynthetic process	IEP	HCCA
BP	GO:0009161	ribonucleoside monophosphate metabolic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009167	purine ribonucleoside monophosphate metabolic process	IEP	HCCA
BP	GO:0009168	purine ribonucleoside monophosphate biosynthetic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
CC	GO:0015934	large ribosomal subunit	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
MF	GO:0016426	tRNA (adenine) methyltransferase activity	IEP	HCCA
MF	GO:0016429	tRNA (adenine-N1-)-methyltransferase activity	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	HCCA
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
MF	GO:0018580	nitronate monooxygenase activity	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
BP	GO:0022618	protein-RNA complex assembly	IEP	HCCA
BP	GO:0030488	tRNA methylation	IEP	HCCA
CC	GO:0031515	tRNA (m1A) methyltransferase complex	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
CC	GO:0034708	methyltransferase complex	IEP	HCCA
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	HCCA
BP	GO:0042816	vitamin B6 metabolic process	IEP	HCCA
BP	GO:0042819	vitamin B6 biosynthetic process	IEP	HCCA
BP	GO:0042822	pyridoxal phosphate metabolic process	IEP	HCCA
BP	GO:0042823	pyridoxal phosphate biosynthetic process	IEP	HCCA
BP	GO:0043414	macromolecule methylation	IEP	HCCA
CC	GO:0043527	tRNA methyltransferase complex	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
CC	GO:0044391	ribosomal subunit	IEP	HCCA
BP	GO:0046037	GMP metabolic process	IEP	HCCA
BP	GO:0046184	aldehyde biosynthetic process	IEP	HCCA
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
MF	GO:0070567	cytidylyltransferase activity	IEP	HCCA
BP	GO:0071826	protein-RNA complex organization	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	HCCA
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	HCCA
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR022669	Ribosomal_L2_C	105	231
IPR022666	Rbsml_prot_L2_RNA-bd_dom	20	96

External Links

No external refs found!

JINXUAN15967 (EMB2296)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation