JINXUAN22468

Description : 30S ribosomal protein S6 alpha, chloroplastic & original description: none

Gene families : OG0004748 (OrthoFinder) Phylogenetic Tree(s): OG0004748_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: JINXUAN22468
Cluster	HCCA: Cluster_330

Target	Alias	Description	ECC score	Gene Family Method
ANJIBAICHA27900	No alias	30S ribosomal protein S6 alpha, chloroplastic &...	0.03	OrthoFinder
FUDINGDABAI20212	No alias	30S ribosomal protein S6 alpha, chloroplastic &...	0.07	OrthoFinder
GWHTAZTZ040773	No alias	30S ribosomal protein S6 alpha, chloroplastic &...	0.03	OrthoFinder
GWHTAZTZ040780	No alias	30S ribosomal protein S6 alpha, chloroplastic &...	0.03	OrthoFinder
LJCHANGYE22858	No alias	30S ribosomal protein S6 alpha, chloroplastic &...	0.04	OrthoFinder
TIEGUANYIN11931	No alias	30S ribosomal protein S6 alpha, chloroplastic &...	0.04	OrthoFinder
ANJIBAICHA27900	No alias	30S ribosomal protein S6 alpha, chloroplastic &...	0.03	OrthoFinder
CSS0022378.1	CSS0022378	30S ribosomal protein S6 alpha, chloroplastic &...	0.05	OrthoFinder
CSS0038140.1	CSS0038140	30S ribosomal protein S6 alpha, chloroplastic &...	0.07	OrthoFinder
FUDINGDABAI20212	No alias	30S ribosomal protein S6 alpha, chloroplastic &...	0.07	OrthoFinder
GWHTAZTZ040773	No alias	30S ribosomal protein S6 alpha, chloroplastic &...	0.03	OrthoFinder
GWHTAZTZ040780	No alias	30S ribosomal protein S6 alpha, chloroplastic &...	0.03	OrthoFinder
LJCHANGYE22858	No alias	30S ribosomal protein S6 alpha, chloroplastic &...	0.04	OrthoFinder
TIEGUANYIN11931	No alias	30S ribosomal protein S6 alpha, chloroplastic &...	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019843	rRNA binding	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0003871	5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity	IEP	HCCA
MF	GO:0004525	ribonuclease III activity	IEP	HCCA
MF	GO:0008172	S-methyltransferase activity	IEP	HCCA
BP	GO:0008652	amino acid biosynthetic process	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
MF	GO:0016209	antioxidant activity	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
MF	GO:0032296	double-stranded RNA-specific ribonuclease activity	IEP	HCCA
MF	GO:0042085	5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000529	Ribosomal_S6	50	148

External Links

No external refs found!

JINXUAN22468

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation