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  5. JINXUAN30242

JINXUAN30242 (CRK8)


Aliases : CRK8

Description : Retrovirus-related Pol polyprotein from transposon RE2 & original description: none


Gene families : OG0024842 (OrthoFinder) Phylogenetic Tree(s): OG0024842_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: JINXUAN30242
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
ECHA41268 CRK8 Retrovirus-related Pol polyprotein from transposon RE2... 0.03 OrthoFinder
HUANGJINYA19316 CRK8 Retrovirus-related Pol polyprotein from transposon RE1... 0.03 OrthoFinder
LJCHANGYE02437 CRK8 Retrovirus-related Pol polyprotein from transposon RE1... 0.02 OrthoFinder
TIEGUANYIN46439 CRK8 Retrovirus-related Pol polyprotein from transposon RE1... 0.02 OrthoFinder
ZHONGCHA00862 CRK8 Retrovirus-related Pol polyprotein from transposon RE1... 0.02 OrthoFinder
ZIJUAN14835 CRK8 Retrovirus-related Pol polyprotein from transposon RE1... 0.02 OrthoFinder
ECHA41268 CRK8 Retrovirus-related Pol polyprotein from transposon RE2... 0.03 OrthoFinder
HUANGJINYA19316 CRK8 Retrovirus-related Pol polyprotein from transposon RE1... 0.03 OrthoFinder
LJCHANGYE02437 CRK8 Retrovirus-related Pol polyprotein from transposon RE1... 0.02 OrthoFinder
TIEGUANYIN46439 CRK8 Retrovirus-related Pol polyprotein from transposon RE1... 0.02 OrthoFinder
ZHONGCHA00862 CRK8 Retrovirus-related Pol polyprotein from transposon RE1... 0.02 OrthoFinder
ZIJUAN14835 CRK8 Retrovirus-related Pol polyprotein from transposon RE1... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 RNA endonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 RNA nuclease activity IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016891 RNA endonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
CC GO:0030076 light-harvesting complex IEP HCCA
CC GO:0030089 phycobilisome IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013103 RVT_2 114 353
No external refs found!