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Description : Retrovirus-related Pol polyprotein from transposon RE1 & original description: none
Gene families : OG0000385 (OrthoFinder) Phylogenetic Tree(s): OG0000385_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: JINXUAN31116 | |
| Cluster | HCCA: Cluster_219 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| ANJIBAICHA39182 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.07 | OrthoFinder | |
| FUDINGDABAI15528 | No alias | Uncharacterized mitochondrial protein AtMg00820 &... | 0.22 | OrthoFinder | |
| FUDINGDABAI29169 | No alias | Uncharacterized mitochondrial protein AtMg00820 &... | 0.4 | OrthoFinder | |
| FUDINGDABAI59838 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.07 | OrthoFinder | |
| HUANGJINYA11498 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.08 | OrthoFinder | |
| JINXUAN55139 | No alias | Retrovirus-related Pol polyprotein from transposon RE2... | 0.25 | OrthoFinder | |
| LJCHANGYE55950 | No alias | Retrovirus-related Pol polyprotein from transposon RE2... | 0.22 | OrthoFinder | |
| TIEGUANYIN22681 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.11 | OrthoFinder | |
| ZHONGCHA17090 | ORF170 | Retrovirus-related Pol polyprotein from transposon TNT... | 0.11 | OrthoFinder | |
| ZHONGCHA50563 | No alias | no annotation & original description: none | 0.14 | OrthoFinder | |
| ZIJUAN29025 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.11 | OrthoFinder | |
| ZIJUAN54960 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.06 | OrthoFinder | |
| ANJIBAICHA39182 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.07 | OrthoFinder | |
| CSS0018474.1 | CSS0018474, CRK8 | Retrovirus-related Pol polyprotein from transposon TNT... | 0.4 | OrthoFinder | |
| CSS0035221.1 | CSS0035221 | no annotation & original description: gene=CSS0035221 | 0.04 | OrthoFinder | |
| FUDINGDABAI15528 | No alias | Uncharacterized mitochondrial protein AtMg00820 &... | 0.22 | OrthoFinder | |
| FUDINGDABAI29169 | No alias | Uncharacterized mitochondrial protein AtMg00820 &... | 0.4 | OrthoFinder | |
| FUDINGDABAI59838 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.07 | OrthoFinder | |
| HUANGJINYA11498 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.08 | OrthoFinder | |
| JINXUAN55139 | No alias | Retrovirus-related Pol polyprotein from transposon RE2... | 0.25 | OrthoFinder | |
| LJCHANGYE55950 | No alias | Retrovirus-related Pol polyprotein from transposon RE2... | 0.22 | OrthoFinder | |
| TIEGUANYIN22681 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.11 | OrthoFinder | |
| ZHONGCHA17090 | ORF170 | Retrovirus-related Pol polyprotein from transposon TNT... | 0.11 | OrthoFinder | |
| ZHONGCHA50563 | No alias | no annotation & original description: none | 0.14 | OrthoFinder | |
| ZIJUAN29025 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.11 | OrthoFinder | |
| ZIJUAN54960 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.06 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006260 | DNA replication | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0015074 | DNA integration | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013103 | RVT_2 | 53 | 227 |
| No external refs found! |