JINXUAN42076

Description : Nuclear pore complex protein NUP50A & original description: none

Gene families : OG0019870 (OrthoFinder) Phylogenetic Tree(s): OG0019870_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: JINXUAN42076
Cluster	HCCA: Cluster_220

Target	Alias	Description	ECC score	Gene Family Method
GWHTACFB013638	No alias	Nuclear pore complex protein NUP50A & original...	0.04	OrthoFinder
CSS0044508.1	CSS0044508	Nuclear pore complex protein NUP50A & original...	0.07	OrthoFinder
GWHTACFB013638	No alias	Nuclear pore complex protein NUP50A & original...	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004190	aspartic-type endopeptidase activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005643	nuclear pore	IEA	Interproscan
CC	GO:0005789	endoplasmic reticulum membrane	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
CC	GO:0008287	protein serine/threonine phosphatase complex	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016485	protein processing	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0019208	phosphatase regulator activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019888	protein phosphatase regulator activity	IEA	Interproscan
BP	GO:0023041	neuronal signal transduction	IEA	Interproscan
MF	GO:0030234	enzyme regulator activity	None	Extended
CC	GO:0030289	protein phosphatase 4 complex	IEA	Interproscan
CC	GO:0030867	rough endoplasmic reticulum membrane	IEA	Interproscan
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046907	intracellular transport	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051604	protein maturation	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0070001	aspartic-type peptidase activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1903293	phosphatase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000731	DNA synthesis involved in DNA repair	IEP	HCCA
CC	GO:0005730	nucleolus	IEP	HCCA
BP	GO:0006270	DNA replication initiation	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
MF	GO:0008134	transcription factor binding	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
MF	GO:0016597	amino acid binding	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
MF	GO:0016743	carboxyl- or carbamoyltransferase activity	IEP	HCCA
CC	GO:0019031	viral envelope	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
CC	GO:0019867	outer membrane	IEP	HCCA
CC	GO:0030684	preribosome	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
MF	GO:0031406	carboxylic acid binding	IEP	HCCA
CC	GO:0032040	small-subunit processome	IEP	HCCA
CC	GO:0036338	viral membrane	IEP	HCCA
MF	GO:0042393	histone binding	IEP	HCCA
MF	GO:0043177	organic acid binding	IEP	HCCA
CC	GO:0044423	virion component	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0071897	DNA biosynthetic process	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000156	Ran_bind_dom	272	387
IPR015007	NUP2/50/61	13	73

External Links

No external refs found!

JINXUAN42076

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation