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  5. JINXUAN44890

JINXUAN44890 (IRX6, COBL4)


Aliases : IRX6, COBL4

Description : COBRA-like protein 4 & original description: none


Gene families : OG0001878 (OrthoFinder) Phylogenetic Tree(s): OG0001878_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: JINXUAN44890
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
ANJIBAICHA48999 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.03 OrthoFinder
ECHA42720 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.17 OrthoFinder
ECHA47220 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.03 OrthoFinder
FUDINGDABAI36693 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.19 OrthoFinder
GWHTACFB014144 IRX6, COBL4 COBRA-like protein 4 & original description:... 0.14 OrthoFinder
GWHTAZTZ005307 IRX6, COBL4 COBRA-like protein 4 & original description:... 0.04 OrthoFinder
HUANGJINYA36168 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.05 OrthoFinder
HUANGJINYA36759 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.11 OrthoFinder
HUANGJINYA42936 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.05 OrthoFinder
LJCHANGYE49947 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.06 OrthoFinder
TIEGUANYIN28115 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.04 OrthoFinder
TIEGUANYIN29018 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.04 OrthoFinder
ZHONGCHA45094 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.03 OrthoFinder
ZIJUAN36302 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.03 OrthoFinder
ANJIBAICHA48999 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.03 OrthoFinder
CSS0037297.1 COBL4, CSS0037297, IRX6 COBRA-like protein 4 & original description: gene=CSS0037297 0.06 OrthoFinder
CSS0039433.1 IRX6, COBL4, CSS0039433 COBRA-like protein 4 & original description: gene=CSS0039433 0.11 OrthoFinder
ECHA42720 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.17 OrthoFinder
ECHA47220 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.03 OrthoFinder
FUDINGDABAI36693 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.19 OrthoFinder
GWHTACFB014144 IRX6, COBL4 COBRA-like protein 4 & original description:... 0.14 OrthoFinder
GWHTAZTZ005307 IRX6, COBL4 COBRA-like protein 4 & original description:... 0.04 OrthoFinder
HUANGJINYA36168 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.05 OrthoFinder
HUANGJINYA36759 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.11 OrthoFinder
HUANGJINYA42936 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.05 OrthoFinder
LJCHANGYE49947 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.06 OrthoFinder
TIEGUANYIN28115 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.04 OrthoFinder
TIEGUANYIN29018 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.04 OrthoFinder
ZHONGCHA45094 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.03 OrthoFinder
ZIJUAN36302 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0010215 cellulose microfibril organization IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0042255 ribosome assembly IEP HCCA
BP GO:0042256 cytosolic ribosome assembly IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR006918 COBRA_pln 43 206
No external refs found!