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  5. JINXUAN48729

JINXUAN48729 (IRX6, COBL4)


Aliases : IRX6, COBL4

Description : COBRA-like protein 4 & original description: none


Gene families : OG0001878 (OrthoFinder) Phylogenetic Tree(s): OG0001878_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: JINXUAN48729
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
CSA006325.1 CSA006325, IRX6, COBL4 COBRA-like protein 4 & original description: none 0.04 OrthoFinder
ECHA47220 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.04 OrthoFinder
HUANGJINYA42936 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.04 OrthoFinder
LJCHANGYE49947 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.06 OrthoFinder
TIEGUANYIN34171 COBL4, IRX6 COBRA-like protein 4 & original description: none 0.1 OrthoFinder
ZHONGCHA45094 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.02 OrthoFinder
ZIJUAN36302 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.04 OrthoFinder
CSA006325.1 CSA006325, IRX6, COBL4 COBRA-like protein 4 & original description: none 0.04 OrthoFinder
CSS0039433.1 IRX6, COBL4, CSS0039433 COBRA-like protein 4 & original description: gene=CSS0039433 0.07 OrthoFinder
ECHA47220 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.04 OrthoFinder
HUANGJINYA42936 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.04 OrthoFinder
LJCHANGYE49947 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.06 OrthoFinder
TIEGUANYIN34171 COBL4, IRX6 COBRA-like protein 4 & original description: none 0.1 OrthoFinder
ZHONGCHA45094 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.02 OrthoFinder
ZIJUAN36302 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.04 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0010215 cellulose microfibril organization IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000228 nuclear chromosome IEP HCCA
CC GO:0000793 condensed chromosome IEP HCCA
CC GO:0000794 condensed nuclear chromosome IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005747 mitochondrial respiratory chain complex I IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007131 reciprocal meiotic recombination IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
BP GO:0008643 carbohydrate transport IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP HCCA
CC GO:0009512 cytochrome b6f complex IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0030964 NADH dehydrogenase complex IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034219 carbohydrate transmembrane transport IEP HCCA
BP GO:0035825 homologous recombination IEP HCCA
CC GO:0042597 periplasmic space IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0045158 electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity IEP HCCA
CC GO:0045271 respiratory chain complex I IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0061617 MICOS complex IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0098657 import into cell IEP HCCA
BP GO:0098704 carbohydrate import across plasma membrane IEP HCCA
BP GO:0098739 import across plasma membrane IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:0140527 reciprocal homologous recombination IEP HCCA
BP GO:1901031 regulation of response to reactive oxygen species IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
BP GO:1902882 regulation of response to oxidative stress IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR006918 COBRA_pln 43 206
No external refs found!