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  5. TIEGUANYIN04456

TIEGUANYIN04456 (DCP5)


Aliases : DCP5

Description : Protein decapping 5 & original description: none


Gene families : OG0003708 (OrthoFinder) Phylogenetic Tree(s): OG0003708_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TIEGUANYIN04456
Cluster HCCA: Cluster_407

Target Alias Description ECC score Gene Family Method Actions
CSS0032628.1 CSS0032628, DCP5 Protein decapping 5 & original description: gene=CSS0032628 0.03 OrthoFinder
CSS0035030.1 CSS0035030, DCP5 Protein decapping 5 & original description: gene=CSS0035030 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006376 mRNA splice site recognition IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0022618 protein-RNA complex assembly IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071826 protein-RNA complex organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR025609 Lsm14-like_N 15 88
IPR019050 FDF_dom 457 554
No external refs found!