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  3. Camellia sinensis var. sinensis cv. 'Tieguanyin'
  4. Sequence
  5. TIEGUANYIN09032

TIEGUANYIN09032


Description : no annotation & original description: none


Gene families : OG0003794 (OrthoFinder) Phylogenetic Tree(s): OG0003794_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TIEGUANYIN09032
Cluster HCCA: Cluster_407

Target Alias Description ECC score Gene Family Method Actions
ANJIBAICHA25927 No alias no annotation & original description: none 0.03 OrthoFinder
CSA023201.1 CSA023201 no annotation & original description: none 0.04 OrthoFinder
LJCHANGYE18131 No alias no annotation & original description: none 0.03 OrthoFinder
ANJIBAICHA25927 No alias no annotation & original description: none 0.03 OrthoFinder
CSA023201.1 CSA023201 no annotation & original description: none 0.04 OrthoFinder
CSS0000339.1 CSS0000339 no annotation & original description: gene=CSS0000339 0.03 OrthoFinder
LJCHANGYE18131 No alias no annotation & original description: none 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEA Interproscan
CC GO:0005685 U1 snRNP IEA Interproscan
BP GO:0006376 mRNA splice site recognition IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
BP GO:0019072 viral genome packaging IEP HCCA
BP GO:0019073 viral DNA genome packaging IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0030259 lipid glycosylation IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004882 Luc7-rel 208 327
IPR004882 Luc7-rel 2 171
No external refs found!