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  5. TIEGUANYIN29018

TIEGUANYIN29018 (IRX6, COBL4)


Aliases : IRX6, COBL4

Description : COBRA-like protein 4 & original description: none


Gene families : OG0001878 (OrthoFinder) Phylogenetic Tree(s): OG0001878_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TIEGUANYIN29018
Cluster HCCA: Cluster_272

Target Alias Description ECC score Gene Family Method Actions
ANJIBAICHA48999 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.12 OrthoFinder
ECHA44019 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.19 OrthoFinder
FUDINGDABAI36693 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.16 OrthoFinder
FUDINGDABAI40198 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.1 OrthoFinder
GWHTACFB014144 IRX6, COBL4 COBRA-like protein 4 & original description:... 0.19 OrthoFinder
GWHTACFB014898 IRX6, COBL4 COBRA-like protein 4 & original description:... 0.17 OrthoFinder
GWHTAZTZ005307 IRX6, COBL4 COBRA-like protein 4 & original description:... 0.19 OrthoFinder
HUANGJINYA36168 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.22 OrthoFinder
HUANGJINYA36759 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.06 OrthoFinder
JINXUAN44890 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.04 OrthoFinder
ZIJUAN21604 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.06 OrthoFinder
ANJIBAICHA48999 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.12 OrthoFinder
CSS0012272.1 COBL4, IRX6, CSS0012272 COBRA-like protein 4 & original description: gene=CSS0012272 0.12 OrthoFinder
CSS0039433.1 IRX6, COBL4, CSS0039433 COBRA-like protein 4 & original description: gene=CSS0039433 0.04 OrthoFinder
ECHA44019 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.19 OrthoFinder
FUDINGDABAI36693 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.16 OrthoFinder
FUDINGDABAI40198 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.1 OrthoFinder
GWHTACFB014144 IRX6, COBL4 COBRA-like protein 4 & original description:... 0.19 OrthoFinder
GWHTACFB014898 IRX6, COBL4 COBRA-like protein 4 & original description:... 0.17 OrthoFinder
GWHTAZTZ005307 IRX6, COBL4 COBRA-like protein 4 & original description:... 0.19 OrthoFinder
HUANGJINYA36168 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.22 OrthoFinder
HUANGJINYA36759 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.06 OrthoFinder
JINXUAN44890 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.04 OrthoFinder
ZIJUAN21604 IRX6, COBL4 COBRA-like protein 4 & original description: none 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
BP GO:0010215 cellulose microfibril organization IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0030246 carbohydrate binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
MF GO:0008800 beta-lactamase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0016999 antibiotic metabolic process IEP HCCA
BP GO:0017001 antibiotic catabolic process IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0030653 beta-lactam antibiotic metabolic process IEP HCCA
BP GO:0030655 beta-lactam antibiotic catabolic process IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0051087 protein-folding chaperone binding IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0071824 protein-DNA complex organization IEP HCCA
BP GO:0072338 lactam metabolic process IEP HCCA
BP GO:0072340 lactam catabolic process IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006918 COBRA_pln 69 232
No external refs found!