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  5. TIEGUANYIN42197

TIEGUANYIN42197 (SFR6)


Aliases : SFR6

Description : Mediator of RNA polymerase II transcription subunit 16 & original description: none


Gene families : OG0039012 (OrthoFinder) Phylogenetic Tree(s): OG0039012_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TIEGUANYIN42197
Cluster HCCA: Cluster_58


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0001101 response to acid chemical IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0007548 sex differentiation IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009415 response to water IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0030030 cell projection organization IEP HCCA
BP GO:0030031 cell projection assembly IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044780 bacterial-type flagellum assembly IEP HCCA
BP GO:0044781 bacterial-type flagellum organization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046660 female sex differentiation IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
MF GO:0070840 dynein complex binding IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1902074 response to salt IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!