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  5. TIEGUANYIN42817

TIEGUANYIN42817 (CRK8)


Aliases : CRK8

Description : Retrovirus-related Pol polyprotein from transposon RE1 & original description: none


Gene families : OG0000036 (OrthoFinder) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TIEGUANYIN42817
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
ANJIBAICHA51988 CRK8 Retrovirus-related Pol polyprotein from transposon RE1... 0.05 OrthoFinder
ZIJUAN41816 CRK8 Retrovirus-related Pol polyprotein from transposon RE1... 0.09 OrthoFinder
ZIJUAN54452 CRK8 Retrovirus-related Pol polyprotein from transposon RE1... 0.14 OrthoFinder
ANJIBAICHA51988 CRK8 Retrovirus-related Pol polyprotein from transposon RE1... 0.05 OrthoFinder
ZIJUAN41816 CRK8 Retrovirus-related Pol polyprotein from transposon RE1... 0.09 OrthoFinder
ZIJUAN54452 CRK8 Retrovirus-related Pol polyprotein from transposon RE1... 0.14 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!