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  3. Camellia sinensis var. sinensis cv. 'Tieguanyin'
  4. Sequence
  5. TIEGUANYIN47029

TIEGUANYIN47029


Description : Disease resistance protein RPM1 & original description: none


Gene families : OG0000530 (OrthoFinder) Phylogenetic Tree(s): OG0000530_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TIEGUANYIN47029
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
ECHA02156 No alias no annotation & original description: none 0.04 OrthoFinder
FUDINGDABAI20852 No alias no annotation & original description: none 0.04 OrthoFinder
HUANGJINYA03090 No alias no annotation & original description: none 0.05 OrthoFinder
HUANGJINYA03091 No alias Disease resistance protein RPM1 & original description: none 0.12 OrthoFinder
HUANGJINYA20956 No alias Disease resistance protein RPM1 & original description: none 0.11 OrthoFinder
JINXUAN02042 No alias Disease resistance protein RPM1 & original description: none 0.04 OrthoFinder
LJCHANGYE05238 No alias no annotation & original description: none 0.02 OrthoFinder
LJCHANGYE25642 No alias Disease resistance protein RPM1 & original description: none 0.03 OrthoFinder
LJCHANGYE25643 No alias no annotation & original description: none 0.02 OrthoFinder
TIEGUANYIN06103 No alias Disease resistance protein RPM1 & original description: none 0.04 OrthoFinder
ZHONGCHA01613 No alias Disease resistance protein RPM1 & original description: none 0.04 OrthoFinder
ZHONGCHA22582 No alias no annotation & original description: none 0.08 OrthoFinder
ZIJUAN35234 No alias Disease resistance protein RPM1 & original description: none 0.07 OrthoFinder
ZIJUAN58154 No alias Disease resistance protein RPM1 & original description: none 0.04 OrthoFinder
ECHA02156 No alias no annotation & original description: none 0.04 OrthoFinder
FUDINGDABAI20852 No alias no annotation & original description: none 0.04 OrthoFinder
HUANGJINYA03090 No alias no annotation & original description: none 0.05 OrthoFinder
HUANGJINYA03091 No alias Disease resistance protein RPM1 & original description: none 0.12 OrthoFinder
HUANGJINYA20956 No alias Disease resistance protein RPM1 & original description: none 0.11 OrthoFinder
JINXUAN02042 No alias Disease resistance protein RPM1 & original description: none 0.04 OrthoFinder
LJCHANGYE05238 No alias no annotation & original description: none 0.02 OrthoFinder
LJCHANGYE25642 No alias Disease resistance protein RPM1 & original description: none 0.03 OrthoFinder
LJCHANGYE25643 No alias no annotation & original description: none 0.02 OrthoFinder
TIEGUANYIN06103 No alias Disease resistance protein RPM1 & original description: none 0.04 OrthoFinder
ZHONGCHA01613 No alias Disease resistance protein RPM1 & original description: none 0.04 OrthoFinder
ZHONGCHA22582 No alias no annotation & original description: none 0.08 OrthoFinder
ZIJUAN35234 No alias Disease resistance protein RPM1 & original description: none 0.07 OrthoFinder
ZIJUAN58154 No alias Disease resistance protein RPM1 & original description: none 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
MF GO:0015204 urea transmembrane transporter activity IEP HCCA
BP GO:0015840 urea transport IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016755 aminoacyltransferase activity IEP HCCA
BP GO:0019755 one-carbon compound transport IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0031145 anaphase-promoting complex-dependent catabolic process IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
BP GO:0042742 defense response to bacterium IEP HCCA
BP GO:0042886 amide transport IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0071918 urea transmembrane transport IEP HCCA
MF GO:0097602 cullin family protein binding IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!