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  3. Camellia sinensis var. assamica cv. 'Yunkang 10'
  4. Sequence
  5. CSA000229.1

CSA000229.1 (CSA000229)


Aliases : CSA000229

Description : Zinc finger CCCH domain-containing protein 67 & original description: none


Gene families : OG0019744 (OrthoFinder) Phylogenetic Tree(s): OG0019744_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CSA000229.1
Cluster HCCA: Cluster_317

Target Alias Description ECC score Gene Family Method Actions
ECHA44138 No alias Zinc finger CCCH domain-containing protein 67 &... 0.04 OrthoFinder
GWHTACFB013890 No alias Zinc finger CCCH domain-containing protein 67 &... 0.03 OrthoFinder
HUANGJINYA36972 No alias Zinc finger CCCH domain-containing protein 43 &... 0.03 OrthoFinder
LJCHANGYE43411 No alias Zinc finger CCCH domain-containing protein 67 &... 0.02 OrthoFinder
ECHA44138 No alias Zinc finger CCCH domain-containing protein 67 &... 0.04 OrthoFinder
GWHTACFB013890 No alias Zinc finger CCCH domain-containing protein 67 &... 0.03 OrthoFinder
HUANGJINYA36972 No alias Zinc finger CCCH domain-containing protein 43 &... 0.03 OrthoFinder
LJCHANGYE43411 No alias Zinc finger CCCH domain-containing protein 67 &... 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006270 DNA replication initiation IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0004852 uroporphyrinogen-III synthase activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0006935 chemotaxis IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0019072 viral genome packaging IEP HCCA
BP GO:0019073 viral DNA genome packaging IEP HCCA
MF GO:0019904 protein domain specific binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
CC GO:0033573 high-affinity iron permease complex IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
BP GO:0040011 locomotion IEP HCCA
BP GO:0042330 taxis IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
MF GO:0070567 cytidylyltransferase activity IEP HCCA
CC GO:0072546 EMC complex IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1905862 ferroxidase complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 262 287
IPR000571 Znf_CCCH 496 519
IPR000571 Znf_CCCH 311 335
IPR000571 Znf_CCCH 447 472
IPR000571 Znf_CCCH 217 240
No external refs found!