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  5. CSA002052.1

CSA002052.1 (RACK1C_AT, CSA002052)


Aliases : RACK1C_AT, CSA002052

Description : Guanine nucleotide-binding protein subunit beta-like protein & original description: none


Gene families : OG0007764 (OrthoFinder) Phylogenetic Tree(s): OG0007764_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CSA002052.1
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
GWHTACFB014237 No alias Guanine nucleotide-binding protein subunit beta-like... 0.09 OrthoFinder
GWHTAZTZ005192 No alias Guanine nucleotide-binding protein subunit beta-like... 0.04 OrthoFinder
GWHTAZTZ043381 RACK1C_AT Guanine nucleotide-binding protein subunit beta-like... 0.04 OrthoFinder
HUANGJINYA32371 RACK1C_AT Guanine nucleotide-binding protein subunit beta-like... 0.09 OrthoFinder
TIEGUANYIN23329 RACK1C_AT Guanine nucleotide-binding protein subunit beta-like... 0.04 OrthoFinder
ZHONGCHA36730 RACK1C_AT Guanine nucleotide-binding protein subunit beta-like... 0.06 OrthoFinder
ZIJUAN35214 RACK1C_AT Guanine nucleotide-binding protein subunit beta-like... 0.06 OrthoFinder
GWHTACFB014237 No alias Guanine nucleotide-binding protein subunit beta-like... 0.09 OrthoFinder
GWHTAZTZ005192 No alias Guanine nucleotide-binding protein subunit beta-like... 0.04 OrthoFinder
GWHTAZTZ043381 RACK1C_AT Guanine nucleotide-binding protein subunit beta-like... 0.04 OrthoFinder
HUANGJINYA32371 RACK1C_AT Guanine nucleotide-binding protein subunit beta-like... 0.09 OrthoFinder
TIEGUANYIN23329 RACK1C_AT Guanine nucleotide-binding protein subunit beta-like... 0.04 OrthoFinder
ZHONGCHA36730 RACK1C_AT Guanine nucleotide-binding protein subunit beta-like... 0.06 OrthoFinder
ZIJUAN35214 RACK1C_AT Guanine nucleotide-binding protein subunit beta-like... 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 100 133
IPR001680 WD40_repeat 300 323
IPR001680 WD40_repeat 228 261
IPR001680 WD40_repeat 187 221
IPR001680 WD40_repeat 9 43
IPR001680 WD40_repeat 56 91
IPR001680 WD40_repeat 146 179
No external refs found!