CSA005650.1 (PUB22, CSA005650)

Aliases : PUB22, CSA005650

Description : E3 ubiquitin-protein ligase PUB22 & original description: none

Gene families : OG0030401 (OrthoFinder) Phylogenetic Tree(s): OG0030401_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CSA005650.1
Cluster	HCCA: Cluster_85

Target	Alias	Description	ECC score	Gene Family Method	Actions
ZHONGCHA52075	PUB23	E3 ubiquitin-protein ligase PUB23 & original description: none	0.05	OrthoFinder
ZHONGCHA52075	PUB23	E3 ubiquitin-protein ligase PUB23 & original description: none	0.05	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016755	aminoacyltransferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0009617	response to bacterium	IEP	HCCA
BP	GO:0009620	response to fungus	IEP	HCCA
MF	GO:0010333	terpene synthase activity	IEP	HCCA
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	HCCA
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	HCCA
MF	GO:0020037	heme binding	IEP	HCCA
BP	GO:0030258	lipid modification	IEP	HCCA
BP	GO:0030259	lipid glycosylation	IEP	HCCA
BP	GO:0042742	defense response to bacterium	IEP	HCCA
MF	GO:0046906	tetrapyrrole binding	IEP	HCCA
MF	GO:0050525	cutinase activity	IEP	HCCA
BP	GO:0050832	defense response to fungus	IEP	HCCA
BP	GO:0098542	defense response to other organism	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	16	84

External Links

No external refs found!