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  3. Camellia sinensis var. assamica cv. 'Yunkang 10'
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  5. CSA006867.1

CSA006867.1 (CSA006867)


Aliases : CSA006867

Description : Increased DNA methylation 1 & original description: none


Gene families : OG0006948 (OrthoFinder) Phylogenetic Tree(s): OG0006948_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CSA006867.1
Cluster HCCA: Cluster_272

Target Alias Description ECC score Gene Family Method Actions
ANJIBAICHA19480 No alias Increased DNA methylation 1 & original description: none 0.03 OrthoFinder
ECHA12292 No alias Increased DNA methylation 1 & original description: none 0.03 OrthoFinder
LJCHANGYE15700 No alias Increased DNA methylation 1 & original description: none 0.03 OrthoFinder
ZHONGCHA11087 No alias Increased DNA methylation 1 & original description: none 0.05 OrthoFinder
ANJIBAICHA19480 No alias Increased DNA methylation 1 & original description: none 0.03 OrthoFinder
CSS0035748.2 CSS0035748 Increased DNA methylation 1 & original description:... 0.05 OrthoFinder
ECHA12292 No alias Increased DNA methylation 1 & original description: none 0.03 OrthoFinder
LJCHANGYE15700 No alias Increased DNA methylation 1 & original description: none 0.03 OrthoFinder
ZHONGCHA11087 No alias Increased DNA methylation 1 & original description: none 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
CC GO:0000145 exocyst IEP HCCA
CC GO:0000314 organellar small ribosomal subunit IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
MF GO:0004803 transposase activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
CC GO:0005747 mitochondrial respiratory chain complex I IEP HCCA
CC GO:0005763 mitochondrial small ribosomal subunit IEP HCCA
CC GO:0005801 cis-Golgi network IEP HCCA
CC GO:0005929 cilium IEP HCCA
BP GO:0006313 DNA transposition IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008373 sialyltransferase activity IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
CC GO:0015935 small ribosomal subunit IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0030030 cell projection organization IEP HCCA
BP GO:0030031 cell projection assembly IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
BP GO:0030328 prenylcysteine catabolic process IEP HCCA
BP GO:0030329 prenylcysteine metabolic process IEP HCCA
CC GO:0030964 NADH dehydrogenase complex IEP HCCA
CC GO:0031514 motile cilium IEP HCCA
BP GO:0032196 transposition IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042219 cellular modified amino acid catabolic process IEP HCCA
CC GO:0042995 cell projection IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
CC GO:0044599 AP-5 adaptor complex IEP HCCA
BP GO:0044780 bacterial-type flagellum assembly IEP HCCA
BP GO:0044781 bacterial-type flagellum organization IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
CC GO:0045271 respiratory chain complex I IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0048870 cell motility IEP HCCA
MF GO:0050151 oleate hydratase activity IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
MF GO:0070403 NAD+ binding IEP HCCA
BP GO:0071824 protein-DNA complex organization IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0120025 plasma membrane bounded cell projection IEP HCCA
BP GO:0140352 export from cell IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR032308 TDBD 273 328
IPR032308 TDBD 439 473
IPR019787 Znf_PHD-finger 492 534
No external refs found!