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  5. CSA011717.1

CSA011717.1 (PYRB, CSA011717)


Aliases : PYRB, CSA011717

Description : Aspartate carbamoyltransferase 2, chloroplastic & original description: none


Gene families : OG0005893 (OrthoFinder) Phylogenetic Tree(s): OG0005893_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CSA011717.1
Cluster HCCA: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
FUDINGDABAI00843 PYRB Aspartate carbamoyltransferase 2, chloroplastic &... 0.16 OrthoFinder
HUANGJINYA00864 PYRB Aspartate carbamoyltransferase 3, chloroplastic &... 0.03 OrthoFinder
TIEGUANYIN46852 PYRB Aspartate carbamoyltransferase 2, chloroplastic &... 0.07 OrthoFinder
ZHONGCHA00603 PYRB Aspartate carbamoyltransferase 2, chloroplastic &... 0.03 OrthoFinder
ZIJUAN17125 PYRB Aspartate carbamoyltransferase 2, chloroplastic &... 0.02 OrthoFinder
CSS0017930.1 PYRB, CSS0017930 Aspartate carbamoyltransferase 2, chloroplastic &... 0.06 OrthoFinder
FUDINGDABAI00843 PYRB Aspartate carbamoyltransferase 2, chloroplastic &... 0.16 OrthoFinder
HUANGJINYA00864 PYRB Aspartate carbamoyltransferase 3, chloroplastic &... 0.03 OrthoFinder
TIEGUANYIN46852 PYRB Aspartate carbamoyltransferase 2, chloroplastic &... 0.07 OrthoFinder
ZHONGCHA00603 PYRB Aspartate carbamoyltransferase 2, chloroplastic &... 0.03 OrthoFinder
ZIJUAN17125 PYRB Aspartate carbamoyltransferase 2, chloroplastic &... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEA Interproscan
BP GO:0006520 amino acid metabolic process IEA Interproscan
MF GO:0016597 amino acid binding IEA Interproscan
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
CC GO:0000315 organellar large ribosomal subunit IEP HCCA
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
CC GO:0005762 mitochondrial large ribosomal subunit IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0008962 phosphatidylglycerophosphatase activity IEP HCCA
CC GO:0015630 microtubule cytoskeleton IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0031011 Ino80 complex IEP HCCA
BP GO:0032543 mitochondrial translation IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0039679 viral occlusion body IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051087 protein-folding chaperone binding IEP HCCA
MF GO:0060590 ATPase regulator activity IEP HCCA
CC GO:0070603 SWI/SNF superfamily-type complex IEP HCCA
MF GO:0070840 dynein complex binding IEP HCCA
CC GO:0097346 INO80-type complex IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
CC GO:0140220 pathogen-containing vacuole IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
InterPro domains Description Start Stop
IPR006131 Asp_carbamoyltransf_Asp/Orn-bd 279 426
IPR006132 Asp/Orn_carbamoyltranf_P-bd 96 227
No external refs found!