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  3. Camellia sinensis var. assamica cv. 'Yunkang 10'
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  5. CSA012021.1

CSA012021.1 (CSA012021)


Aliases : CSA012021

Description : Pentatricopeptide repeat-containing protein At1g07590, mitochondrial & original description: none


Gene families : OG0014386 (OrthoFinder) Phylogenetic Tree(s): OG0014386_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CSA012021.1
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
FUDINGDABAI21184 No alias Pentatricopeptide repeat-containing protein At1g07590,... 0.06 OrthoFinder
TIEGUANYIN13821 No alias Pentatricopeptide repeat-containing protein At1g07590,... 0.07 OrthoFinder
FUDINGDABAI21184 No alias Pentatricopeptide repeat-containing protein At1g07590,... 0.06 OrthoFinder
TIEGUANYIN13821 No alias Pentatricopeptide repeat-containing protein At1g07590,... 0.07 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0003008 system process IEP HCCA
BP GO:0003013 circulatory system process IEP HCCA
BP GO:0003018 vascular process in circulatory system IEP HCCA
MF GO:0005179 hormone activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0008217 regulation of blood pressure IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030545 signaling receptor regulator activity IEP HCCA
MF GO:0030546 signaling receptor activator activity IEP HCCA
BP GO:0035150 regulation of tube size IEP HCCA
BP GO:0035296 regulation of tube diameter IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0048018 receptor ligand activity IEP HCCA
MF GO:0051011 microtubule minus-end binding IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0097746 blood vessel diameter maintenance IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 384 426
IPR002885 Pentatricopeptide_repeat 240 286
IPR002885 Pentatricopeptide_repeat 351 375
IPR002885 Pentatricopeptide_repeat 175 202
IPR002885 Pentatricopeptide_repeat 464 488
No external refs found!