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  3. Camellia sinensis var. assamica cv. 'Yunkang 10'
  4. Sequence
  5. CSA031387.1

CSA031387.1 (CSA031387)


Aliases : CSA031387

Description : Homeobox-DDT domain protein RLT3 & original description: none


Gene families : OG0013960 (OrthoFinder) Phylogenetic Tree(s): OG0013960_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CSA031387.1
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
ANJIBAICHA22077 No alias Homeobox-DDT domain protein RLT3 & original description: none 0.03 OrthoFinder
ECHA14566 No alias Homeobox-DDT domain protein RLT3 & original description: none 0.03 OrthoFinder
GWHTAZTZ022421 No alias Homeobox-DDT domain protein RLT3 & original... 0.05 OrthoFinder
JINXUAN18346 No alias Homeobox-DDT domain protein RLT3 & original description: none 0.05 OrthoFinder
JINXUAN18347 No alias Homeobox-DDT domain protein RLT3 & original description: none 0.03 OrthoFinder
ZIJUAN56785 No alias Homeobox-DDT domain protein RLT3 & original description: none 0.03 OrthoFinder
ANJIBAICHA22077 No alias Homeobox-DDT domain protein RLT3 & original description: none 0.03 OrthoFinder
CSS0026010.1 CSS0026010 Homeobox-DDT domain protein RLT3 & original... 0.06 OrthoFinder
ECHA14566 No alias Homeobox-DDT domain protein RLT3 & original description: none 0.03 OrthoFinder
GWHTAZTZ022421 No alias Homeobox-DDT domain protein RLT3 & original... 0.05 OrthoFinder
JINXUAN18346 No alias Homeobox-DDT domain protein RLT3 & original description: none 0.05 OrthoFinder
JINXUAN18347 No alias Homeobox-DDT domain protein RLT3 & original description: none 0.03 OrthoFinder
ZIJUAN56785 No alias Homeobox-DDT domain protein RLT3 & original description: none 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004134 4-alpha-glucanotransferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008514 organic anion transmembrane transporter activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032217 riboflavin transmembrane transporter activity IEP HCCA
BP GO:0032218 riboflavin transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051180 vitamin transport IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0090482 vitamin transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR028942 WHIM1_dom 589 628
IPR018501 DDT_dom 314 368
IPR028941 WHIM2_dom 721 794
No external refs found!