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  5. ZIJUAN54290

ZIJUAN54290


Description : F-box/kelch-repeat protein At5g43190 & original description: none


Gene families : OG0016339 (OrthoFinder) Phylogenetic Tree(s): OG0016339_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ZIJUAN54290
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
LJCHANGYE62278 No alias F-box/kelch-repeat protein At5g43190 & original... 0.04 OrthoFinder
TIEGUANYIN39594 No alias F-box/kelch-repeat protein At5g43190 & original... 0.03 OrthoFinder
LJCHANGYE62278 No alias F-box/kelch-repeat protein At5g43190 & original... 0.04 OrthoFinder
TIEGUANYIN39594 No alias F-box/kelch-repeat protein At5g43190 & original... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004520 DNA endonuclease activity IEP HCCA
MF GO:0004536 DNA nuclease activity IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0009036 type II site-specific deoxyribonuclease activity IEP HCCA
BP GO:0009307 DNA restriction-modification system IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015666 restriction endodeoxyribonuclease activity IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
MF GO:0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0044355 clearance of foreign intracellular DNA IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0071985 multivesicular body sorting pathway IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
BP GO:0099046 clearance of foreign intracellular nucleic acids IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 6 47
No external refs found!