1. Home
  2. Species
  3. Camellia sinensis var. assamica cv. 'Zijuan'
  4. Sequence
  5. ZIJUAN55176

ZIJUAN55176


Description : Probable pectate lyase 4 & original description: none


Gene families : OG0017862 (OrthoFinder) Phylogenetic Tree(s): OG0017862_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ZIJUAN55176
Cluster HCCA: Cluster_522

Target Alias Description ECC score Gene Family Method Actions
GWHTAZTZ022724 No alias Probable pectate lyase 4 & original description:... 0.03 OrthoFinder
GWHTAZTZ022724 No alias Probable pectate lyase 4 & original description:... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004743 pyruvate kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005869 dynactin complex IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0017062 respiratory chain complex III assembly IEP HCCA
MF GO:0030955 potassium ion binding IEP HCCA
BP GO:0031167 rRNA methylation IEP HCCA
MF GO:0031420 alkali metal ion binding IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP HCCA
BP GO:0034551 mitochondrial respiratory chain complex III assembly IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044000 movement in host IEP HCCA
BP GO:0044403 biological process involved in symbiotic interaction IEP HCCA
BP GO:0044409 entry into host IEP HCCA
BP GO:0046718 viral entry into host cell IEP HCCA
BP GO:0051701 biological process involved in interaction with host IEP HCCA
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP HCCA
BP GO:0070475 rRNA base methylation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002022 Pec_lyase 74 237
No external refs found!