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  3. Camellia sinensis var. sinensis cv. 'Fuding Dabaicha'
  4. Sequence
  5. FUDINGDABAI09339

FUDINGDABAI09339 (RPL15)


Aliases : RPL15

Description : 50S ribosomal protein L15, chloroplastic & original description: none


Gene families : OG0017571 (OrthoFinder) Phylogenetic Tree(s): OG0017571_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: FUDINGDABAI09339
Cluster HCCA: Cluster_260

Target Alias Description ECC score Gene Family Method Actions
ANJIBAICHA18732 RPL15 50S ribosomal protein L15, chloroplastic & original... 0.04 OrthoFinder
CSA021766.1 CSA021766, RPL15 50S ribosomal protein L15, chloroplastic & original... 0.14 OrthoFinder
ECHA13173 RPL15 50S ribosomal protein L15, chloroplastic & original... 0.09 OrthoFinder
GWHTACFB003757 RPL15 50S ribosomal protein L15, chloroplastic & original... 0.14 OrthoFinder
GWHTAZTZ030096 RPL15 50S ribosomal protein L15, chloroplastic & original... 0.1 OrthoFinder
HUANGJINYA09618 RPL15 50S ribosomal protein L15, chloroplastic & original... 0.11 OrthoFinder
JINXUAN13436 RPL15 50S ribosomal protein L15, chloroplastic & original... 0.02 OrthoFinder
LJCHANGYE13674 RPL15 50S ribosomal protein L15, chloroplastic & original... 0.12 OrthoFinder
TIEGUANYIN05154 RPL15 50S ribosomal protein L15, chloroplastic & original... 0.08 OrthoFinder
ZHONGCHA11958 RPL15 50S ribosomal protein L15, chloroplastic & original... 0.21 OrthoFinder
ZIJUAN45477 RPL15 50S ribosomal protein L15, chloroplastic & original... 0.16 OrthoFinder
ANJIBAICHA18732 RPL15 50S ribosomal protein L15, chloroplastic & original... 0.04 OrthoFinder
CSA021766.1 CSA021766, RPL15 50S ribosomal protein L15, chloroplastic & original... 0.14 OrthoFinder
CSS0041255.1 RPL15, CSS0041255 50S ribosomal protein L15, chloroplastic & original... 0.27 OrthoFinder
ECHA13173 RPL15 50S ribosomal protein L15, chloroplastic & original... 0.09 OrthoFinder
GWHTACFB003757 RPL15 50S ribosomal protein L15, chloroplastic & original... 0.14 OrthoFinder
GWHTAZTZ030096 RPL15 50S ribosomal protein L15, chloroplastic & original... 0.1 OrthoFinder
HUANGJINYA09618 RPL15 50S ribosomal protein L15, chloroplastic & original... 0.11 OrthoFinder
JINXUAN13436 RPL15 50S ribosomal protein L15, chloroplastic & original... 0.02 OrthoFinder
LJCHANGYE13674 RPL15 50S ribosomal protein L15, chloroplastic & original... 0.12 OrthoFinder
TIEGUANYIN05154 RPL15 50S ribosomal protein L15, chloroplastic & original... 0.08 OrthoFinder
ZHONGCHA11958 RPL15 50S ribosomal protein L15, chloroplastic & original... 0.21 OrthoFinder
ZIJUAN45477 RPL15 50S ribosomal protein L15, chloroplastic & original... 0.16 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP HCCA
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP HCCA
MF GO:0004115 3',5'-cyclic-AMP phosphodiesterase activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006195 purine nucleotide catabolic process IEP HCCA
BP GO:0006198 cAMP catabolic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006480 N-terminal protein amino acid methylation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
CC GO:0008290 F-actin capping protein complex IEP HCCA
BP GO:0008643 carbohydrate transport IEP HCCA
MF GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009154 purine ribonucleotide catabolic process IEP HCCA
BP GO:0009166 nucleotide catabolic process IEP HCCA
BP GO:0009187 cyclic nucleotide metabolic process IEP HCCA
BP GO:0009214 cyclic nucleotide catabolic process IEP HCCA
BP GO:0009261 ribonucleotide catabolic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
MF GO:0015144 carbohydrate transmembrane transporter activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030833 regulation of actin filament polymerization IEP HCCA
BP GO:0030834 regulation of actin filament depolymerization IEP HCCA
BP GO:0030835 negative regulation of actin filament depolymerization IEP HCCA
BP GO:0030837 negative regulation of actin filament polymerization IEP HCCA
BP GO:0031333 negative regulation of protein-containing complex assembly IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032272 negative regulation of protein polymerization IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0034219 carbohydrate transmembrane transport IEP HCCA
BP GO:0034311 diol metabolic process IEP HCCA
BP GO:0034312 diol biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043242 negative regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046058 cAMP metabolic process IEP HCCA
BP GO:0046146 tetrahydrobiopterin metabolic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0051016 barbed-end actin filament capping IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0051494 negative regulation of cytoskeleton organization IEP HCCA
BP GO:0051693 actin filament capping IEP HCCA
BP GO:0052652 cyclic purine nucleotide metabolic process IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072523 purine-containing compound catabolic process IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0098657 import into cell IEP HCCA
BP GO:0098704 carbohydrate import across plasma membrane IEP HCCA
BP GO:0098739 import across plasma membrane IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901292 nucleoside phosphate catabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
BP GO:1901879 regulation of protein depolymerization IEP HCCA
BP GO:1901880 negative regulation of protein depolymerization IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
BP GO:1902904 negative regulation of supramolecular fiber organization IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR021131 Ribosomal_L18e/L15P 107 234
No external refs found!