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  3. Camellia sinensis var. sinensis cv. 'Fuding Dabaicha'
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  5. FUDINGDABAI10355

FUDINGDABAI10355


Description : Ribosome production factor 2 homolog & original description: none


Gene families : OG0017709 (OrthoFinder) Phylogenetic Tree(s): OG0017709_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: FUDINGDABAI10355
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
JINXUAN12852 No alias Ribosome production factor 2 homolog & original... 0.04 OrthoFinder
LJCHANGYE14635 No alias Ribosome production factor 2 homolog & original... 0.05 OrthoFinder
ZHONGCHA10499 No alias Ribosome production factor 2 homolog & original... 0.07 OrthoFinder
CSS0041546.1 CSS0041546 Ribosome production factor 2 homolog & original... 0.04 OrthoFinder
JINXUAN12852 No alias Ribosome production factor 2 homolog & original... 0.04 OrthoFinder
LJCHANGYE14635 No alias Ribosome production factor 2 homolog & original... 0.05 OrthoFinder
ZHONGCHA10499 No alias Ribosome production factor 2 homolog & original... 0.07 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEA Interproscan
MF GO:0019843 rRNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
CC GO:0000408 EKC/KEOPS complex IEP HCCA
CC GO:0000775 chromosome, centromeric region IEP HCCA
CC GO:0000776 kinetochore IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0034508 centromere complex assembly IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0061608 nuclear import signal receptor activity IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex organization IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
MF GO:0106370 protein-L-histidine N-pros-methyltransferase activity IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR007109 Brix 35 231
No external refs found!